Cicer arietinum (chickpea): 101507129
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Entry
101507129 CDS
T02819
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101507129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cam03041
]
101507129
Spliceosome [BR:
cam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101507129
Complex C
U5 SnRNP specific factors
101507129
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFL1
EFG_III
MMR_HSR1
EF-G_D2
Roc
SRPRB
Motif
Other DBs
NCBI-GeneID:
101507129
NCBI-ProteinID:
XP_004508402
UniProt:
A0A1S2YQN3
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All DBs
Position
7:5928822..5934612
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AA seq
990 aa
AA seq
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MDDSLYDEFGNYIGPEIESDQDSDREEEDDDDHDDPNEQHDTAADSDGEAATNGWLTTGS
TDVDMLDNQVVLAEDKKYYPTAEEVYGDDVETLVMDEDEQPLEQPIIKPVKNKKFEVGVK
DSSTYVSSQFMLGLMSNPSLARNVALVGHLQHGKTVFMDMLVEQTHHMSTFDSQSEKHTR
YTDTRIDEQERKISIKTVPMSLVLEDSNSKSYLCNIMDAPGHVNFSDEMTAALRLADGAV
LVVDAAEGVMVNTERAIRHAIQERLPIVVVMNKVDRLITELKLPPKDAYHKLRHTLEVIN
NHISAASSVAGDVQIIDPVAGNVCFASGSAGWSFTLQSFAKLYGKLHGVPLEASKFASRL
WGDFYYHPDTRAFKKKPPVGGGERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAEFGVTL
SNAAYRLNVRPLLRLACSSVFGSASGFTDMLVQHIPSPRDAAIKKVDHIYTGPKDSSIYK
AMTQCDSSGPLMVNITKLYPKSDCSVFDAFGRVYSGKLQTGQAVRVLGEGYSPDDEEDMT
VKEVTKLWVYQARDRMPVAEAPPGSWVLIEGVDASIMKTATLCNVDYDEDVYIFRPLLFN
TLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKD
LRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENG
VVSTDWNRKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKNLLNAVK
DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMA
TPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYLVKAFLPVIESFGF
ETDLRYHTQGQAFCQSAFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGM
SEDVSIGKFFDEAMMVELAQQAADLHQQMI
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagcttatatgatgaattcggtaactacatcggacccgaaatcgagtccgac
caagactccgacagagaagaagaagatgacgacgaccacgacgatcccaacgaacaacac
gacacagccgccgactccgacggcgaagctgccactaacggatggcttacaaccggctcc
accgacgtagacatgctagacaatcaagtagtcctagcagaagacaaaaagtactaccca
acagccgaagaagtttacggcgacgacgtcgaaaccctagttatggacgaagacgaacag
ccactagagcaaccaattatcaaaccagttaagaacaagaaattcgaagtaggtgttaaa
gactcttcaacctacgtttcatcgcagttcatgctagggttaatgtcgaatccttcgttg
gcgagaaatgtggcgttggttggtcatttgcagcatgggaagactgtgtttatggatatg
cttgttgaacagactcatcatatgtcaacttttgattctcagagtgagaaacatacaagg
tatactgatactagaattgatgaacaagagaggaagatatctattaaaactgttccaatg
tcgcttgttttggaagatagtaattccaaatcttatttgtgtaatattatggatgcgcct
ggtcatgttaatttttctgatgaaatgacggctgcgttgaggcttgcagatggcgctgtt
ttggtcgttgatgctgctgaaggagtcatggtaaacactgagagggcaatacgccatgca
attcaggagcgactgcctattgttgttgtaatgaataaggttgacaggctcataactgaa
cttaaactacctccaaaagatgcttaccataaattgaggcacactttggaagtcattaat
aaccacatatctgctgcctcgtcagttgccggtgatgtccaaattatagaccctgttgct
ggaaatgtttgtttcgcaagtggcagcgctggatggtcatttacattgcaatcatttgct
aaactgtatggtaagctacatggagttccattggaagctagtaaatttgcttctcgccta
tggggtgacttttattatcatcctgataccagagccttcaaaaagaaaccccccgtgggt
ggtggggaacgatcttttgttgagtttgtactggagccactttacaagatatatagccaa
gtgattggggaacataaaaagagtgtagagacaacccttgctgaatttggagttactcta
agtaatgcagcctataggttgaatgttagacctttgctaaggctggcttgtagctctgtt
tttggttcagcttcaggttttactgacatgcttgttcagcacataccttcaccaagagat
gctgcaattaagaaagtcgatcacatatataccggacctaaagactcgtccatttacaaa
gccatgacacagtgtgattcttctggcccactgatggttaatataaccaaattgtatcca
aaatctgattgtagtgtgtttgatgctttcggtagagtttacagtggtaagttacagaca
ggacaggccgtccgtgttctaggagaaggatactcaccggatgacgaggaggatatgact
gtaaaagaagtaacaaagttgtgggtttatcaagctcgcgacaggatgccagtagctgag
gctcctccaggttcttgggttttgattgaaggtgtggatgcttcaataatgaaaaccgca
actctttgtaacgtggactatgatgaggatgtatacatattcaggccccttctgttcaat
actctgtcagtggtgaaaacagccactgagccattaaacccaagtgagttgccaaaaatg
gttgagggcctgaggaaaattagcaagagttatcctttagcagttactaaagttgaggag
tctggggaacacactatattagggactggtgagctgtacttagattcaattatgaaggac
ctgagagagctctattctgaagttgaagtcaaggtagcagatcctgttgtctcattttgt
gaaacagttgtcgaatcttcatcaatgaaatgttttgctgaaacaccaaacaagaagaac
aaaataacaatgattgctgagccactagaaagaggtcttgcagaagacatagaaaatggt
gttgttagcacagactggaacagaaagaaactaggtgaatttttccagactaagtatgac
tgggatcttcttgctgcacggtccatctgggcatttggccctgataagcagggccccaat
attctgttagatgatacccttccgactgaagttgacaagaatctgcttaatgctgttaag
gattccattgttcagggatttcagtggggtgcacgagaaggacctttgtgtgatgagccc
atcagaaatgttaaatttaagattgttgatgcaaggattgcccctgagcctcttcatcgt
ggatctggccagattattccaacagcacgacgagtggcttattctgctttccttatggct
acccctcggcttatggaaccagtatattacgttgagattcaaacaccaattgattgtgta
tctgcaatatacactgtgttgtctcgtagacgtggacatgttactgctgatgttcctcaa
ccaggcaccccagcttatcttgttaaggcatttttgcccgtgatagaatcttttggtttt
gagacagacttgagataccacacgcaaggtcaagcattttgccaatcagcttttgatcat
tgggctattgttccaggagatcctctggacaaaagcattgttttgcgcccacttgaacct
gcaccaatccagcatcttgcccgtgagtttatggtaaaaacaaggcgtaggaagggaatg
agtgaggatgtaagtataggtaagttctttgatgaggctatgatggttgaactcgcacag
caggcggcagaccttcatcaacaaatgatatga
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