Cobetia amphilecti: LCW13_04875
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Entry
LCW13_04875 CDS
T07922
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
camh
Cobetia amphilecti
Pathway
camh01501
beta-Lactam resistance
camh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LCW13_04875
01503 Cationic antimicrobial peptide (CAMP) resistance
LCW13_04875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
camh03036
]
LCW13_04875
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
camh02000
]
LCW13_04875
01504 Antimicrobial resistance genes [BR:
camh01504
]
LCW13_04875
Chromosome and associated proteins [BR:
camh03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LCW13_04875
Transporters [BR:
camh02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LCW13_04875
Antimicrobial resistance genes [BR:
camh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LCW13_04875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
BSH_CzcB
Beta-barrel_RND_2
HH_EMRA
HH_CzcB
HH_YBHG
BSH_YknX
Fez1
BphC_D1
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
UBU49597
LinkDB
All DBs
Position
complement(1144189..1145487)
Genome browser
AA seq
432 aa
AA seq
DB search
MAPTSPSQSRLQRHPLAFNARRLGLLPASLLLVGALLAGCSGDKEEAGQGSAAGASQAAQ
VDVVTVTAQDVPLTTELPGRTRAYQIAEVRPQVGGIIESRDFTEGSDVEEGQVLYHIDSR
TYRADVESAKASLARAEASLNTSSLKAKRYKNLVARKMVSQQDYDDAVATVGEDRADVAS
AKAAVSSAQINLDYTRVTSPISGRIGKSSVTKGALVTASQETSLATVQQLDPIYVDLTQS
ATEVLRLKRELGENRDAATAPVQTEVELVMEDGSVYGAKGKLQFADVTVDQGTGMVTLRA
LFPNEDELLLPGMFVRARLTEAVAKDAILIPQKAVSRDSTGQASVMTVNAENKVEAKQVV
IGQAIDNQWLVTSGLDSNDKVIVSGLQKIKPGATVEIASDETGTDQNAASQSRTAASSDS
SESEQARTGDSQ
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggccccgacttcccccagtcaatcccgcttgcagagacacccattggctttcaatgcc
cgccgcctcggcctgcttccggcaagcctgctgctggtcggtgccctgctggccggctgt
agcggcgacaaggaggaggctggccaaggctccgccgcaggtgccagccaggccgctcag
gtcgatgtcgtcaccgtcactgcccaggatgtaccgctcaccaccgaacttccgggccgc
acgcgtgcctatcagatcgcggaagtacgtccgcaggtcggcggcatcatcgaatcgcgc
gacttcaccgaaggcagtgacgtcgaggaaggtcaggtgctctatcacatcgattcgcgc
acctatcgcgccgatgtcgaaagcgccaaggcgagcctggcgcgtgccgaggcgagcctc
aacacctcgagcctcaaggccaagcgctacaagaacctcgtcgcgcgcaagatggtcagc
cagcaggattacgatgatgccgtggccaccgtcggcgaagaccgtgccgatgtcgcctcg
gccaaggccgcggtatccagcgcgcagatcaacctggattacaccagggtcacctcaccg
atcagtggccgtatcggcaagtccagcgtcaccaagggcgcactggtcacggccagccag
gaaacaagcctggccaccgtccagcagctggaccccatctatgtcgacctgacccagtcc
gccaccgaggtgctgcgtctcaagcgtgagctgggcgagaatcgcgatgccgccaccgca
ccggtccagacggaagtcgagctggtgatggaagacggcagcgtctatggcgccaagggc
aagctgcagttcgcggatgtcactgtcgaccaggggaccggcatggtcacgctgcgcgca
ctgttccccaacgaagatgagctgctgctgccgggcatgttcgtgcgtgcccgcctgacc
gaagccgtcgccaaggatgccatcctgattccgcagaaggccgtgagccgtgacagcacg
ggccaggccagcgtgatgacggtcaatgccgagaacaaggtcgaggccaagcaggtcgtg
atcggtcaggccatcgacaatcagtggctggtgaccagcggcctcgacagcaatgacaag
gtcatcgtcagcggtctgcagaagatcaagccgggtgccacggtcgagatcgcctcggac
gagacaggcactgaccagaacgccgcatctcagtcgcggactgctgccagcagcgactcc
tcggaaagtgaacaggccaggaccggcgatagccagtaa
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