Caproicibacterium amylolyticum: H6X83_03665
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Entry
H6X83_03665 CDS
T07171
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
caml
Caproicibacterium amylolyticum
Pathway
caml03030
DNA replication
caml03430
Mismatch repair
caml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H6X83_03665
03430 Mismatch repair
H6X83_03665
03440 Homologous recombination
H6X83_03665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caml03032
]
H6X83_03665
03400 DNA repair and recombination proteins [BR:
caml03400
]
H6X83_03665
Enzymes [BR:
caml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H6X83_03665
DNA replication proteins [BR:
caml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H6X83_03665
DNA repair and recombination proteins [BR:
caml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H6X83_03665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
Stn1
Motif
Other DBs
NCBI-ProteinID:
QNO18741
UniProt:
A0A7G9WJ79
LinkDB
All DBs
Position
821819..825334
Genome browser
AA seq
1171 aa
AA seq
DB search
MFVHLHLHTEYSLLDGACRIERLLDTAQARGDKAVAITDHGVMYGAVDFYKAAKKRGIKP
IIGCEVYVAQRSRFDRTRELDGENRHLVLLCENNTGYQNLIQMVSRAWTEGFYSKPRVDM
ELLGKYHEGIIALSACLAGEIPRALSANDYPLAKEAALRYEAIFGENNFYLELQDHGLPE
QKRINPQIIRLSQETGIPLVVTNDCHYIEQEDNEMHHILLCIQTNHTLDEEGGLEFGSKE
FYYKTEEQMRALFPEHPEAADNTAKIAERCNVEFEFGKTKLPRFDTPNGQDNVAYFREKC
YAGLHRHYGGNPPPEITQRLEYELDTIQKMGYVNYYLIVHDFVRHAKEVGIPVGPGRGSG
AGSLAAYCIGITGIDPIQYDLLFERFLNPERVSMPDFDIDFADDRRPEMIDYVVDKYGAD
HVAQIVTFGTMAARGSVRDVGRVLGMSYAAVDSVAKLIPTVPGQNITLDKALESSKELRA
RYDEDPQVKRLLDMARKLEGMPRNASTHAAGVVITDKPVAEYVPLAKNNDSTVCQYTMTT
LEELGLLKMDFLGLRNLSVIHDAEEMIQREKPDFKISEIPLDEPKVYALFTAGNTEGIFQ
FESAGMRSMMMQMKPEKLEDLIAANSLYRPGPMEFIPKYIQNRQHPERITYAHPLLKPIL
KVTYGCIVYQEQVMQVFRTLAGYSLGRADIVRRAMSKKKHDVMQREKEIFIHGLQAEDGT
WEVPGCLRNGVDEQTALKIYGEMESFASYAFNKSHAAAYSYLAYQTAYLKCFYPRQYMAA
LLTSVLDSTGKLSGYIAECGRLHIRVLAPDINSSEAAFTVCGKDIRFGLLAVRNLGRGLI
DAVIGERRQFGAYRSFYDFCKRTFDKMNRRSLESFVKCGALDGLGSNRREMMTAVPLVLD
ALANDKRRNVEGQIGFFDQPDEPNGAEEDFQMPSMSDYSTGDRLAMEKEVTGMFLSGNPL
ADYEHLYSKIGAAKIGDILENFENEQGGRWHDGDRVCLLGMVAGIKTKVTKNNSTMAFVT
LEDSCGAMEILVFPQTLAHVSPLLEEGKALCVTGKLSVREEEEPKLLCDDVRAAADAESA
QRQPPVPPAVPAAGKHVKPGLYLKVPNETDPAYLRAKKYLAVFDGRTQLYVVFAQEKKMF
RAPASCGVDVNEVLLRELRGLLGNTNVAYVQ
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcatttacatcttcatacggaatacagccttttggacggtgcctgccgcatt
gagcggctgttggacacagcacaggcacgcggtgacaaggcagttgcaattaccgaccac
ggcgtaatgtacggcgcggtcgatttttataaggcggcaaaaaaacgcggcattaagccg
attattggctgtgaagtttatgtggcacagcgcagccgctttgaccgtacacgcgaattg
gacggtgaaaaccgccatttggtgctgctgtgcgaaaacaataccggctatcaaaatcta
atccagatggtcagccgtgcatggacggagggcttttacagcaaaccgcgtgtggatatg
gaactgctgggaaagtaccatgagggcatcattgcgctttccgcttgtttggccggtgag
attccgcgggcactcagcgcaaatgactatccgcttgcaaaggaagctgcgctgcggtac
gaagctattttcggcgaaaataatttttacctggaactgcaggaccacggcctgccggag
cagaagcggattaacccgcagattatccggctttcgcaggaaacagggattccactggtt
gtaacaaacgactgccattacattgaacaggaagacaacgaaatgcaccacatcctgctt
tgcatccagaccaaccacacgctggatgaggaaggcgggctggagtttggcagcaaagaa
ttttactacaaaaccgaggagcagatgcgcgcactttttccggagcatccggaggcagcg
gataacaccgctaaaatagctgagcggtgcaacgtggaatttgaattcggaaaaaccaag
ctgccgcggtttgacacaccaaacggacaggacaacgtggcttatttccgtgaaaaatgt
tatgccgggctgcaccggcactacggcggaaatccgccgccggaaattacacagcggctg
gaatacgaactggataccatacaaaaaatggggtatgtcaactactatctcattgttcat
gattttgttcggcacgcgaaagaagtcggaattccggtgggcccggggcgtggctccggc
gcgggcagccttgccgcatactgcatcggtattaccggtattgacccgattcagtatgac
ctgctgtttgaacggtttttgaatccggaacgcgtcagtatgcctgactttgatattgac
tttgcggatgaccgccgtccggaaatgattgattacgtcgtggacaaatacggtgccgac
catgtggcacagattgtgacttttggcaccatggcggcacgcggctctgtacgcgatgtc
ggccgggtgctgggaatgtcctatgcggcagtggacagcgttgcaaagcttatccccact
gtgccgggacagaatatcacgctggacaaagcactggaaagctccaaggaactcagagca
cgctatgacgaagatccgcaggtgaagcgtctgctggatatggcgcgtaagctggagggt
atgccacgcaatgcttctacgcatgccgccggcgttgtcattacggacaagcctgtggcg
gaatatgtaccgcttgcgaaaaacaatgattctaccgtgtgccagtacacgatgacaaca
ctggaagaactgggcctgctgaaaatggatttccttggtctgcgcaacctttctgtgatt
cacgacgcagaggagatgattcagcgggaaaaaccggattttaaaatcagcgaaattccg
ctggatgagccgaaggtatacgctctttttacagcgggcaacacagaaggaattttccag
tttgagtccgccggcatgcgcagcatgatgatgcagatgaaaccggaaaagctggaggat
ttgattgcagcgaattcgctgtatcgtccgggaccaatggagtttataccgaagtacatt
caaaatcgtcagcatccggagaggataacttatgcacatcccctgctgaaaccaattcta
aaagtaacctatggctgcattgtatatcaggaacaggtcatgcaggtgtttcgcacactc
gcggggtacagccttggccgtgcagacattgtacggcgcgccatgagcaagaagaaacat
gatgtcatgcagcgcgaaaaagaaattttcattcacggcctgcaggcagaggacggtact
tgggaggtgccgggctgcctgcgaaacggtgtggatgaacagacggcattgaaaatttac
ggcgaaatggaaagcttcgcttcctatgcgttcaataagtcccatgctgccgcgtattcg
tatttagcgtatcagaccgcatatttgaaatgcttttatccgcgccagtatatggcggcg
ctgttaaccagtgtgctggacagcaccggcaaactgtctgggtacattgctgaatgcggg
cggctgcatatccgggtgcttgcaccggatatcaacagcagcgaagccgcttttaccgta
tgtggcaaggacatccgctttggtttgcttgcagtacgaaatctggggcgcgggctgatt
gacgccgtgattggggaacgcaggcagtttggagcgtaccgttctttttatgatttctgt
aagcggacctttgacaaaatgaaccgccgctctttggaaagctttgtaaaatgcggcgca
ttagacggtcttgggagcaaccgccgagagatgatgactgcggtcccgctggtgctggat
gcattggcgaacgacaagcgccgcaatgttgaagggcagattggcttttttgaccagccg
gatgagccgaacggtgcggaagaagatttccaaatgccgtccatgtcggattacagtacg
ggcgaccggctggcaatggaaaaagaagtcaccggtatgttcctttccggcaatccgctg
gcagattacgagcatttgtacagtaaaatcggcgcggcaaaaatcggtgacattctggaa
aactttgaaaatgaacagggcggccgctggcacgacggcgaccgtgtgtgcttattgggc
atggttgccggaataaaaacgaaggttacgaaaaacaatagtactatggcatttgttaca
ttggaggattcctgtggcgcaatggaaatactcgtcttcccgcagacacttgcgcacgtt
tccccgctgctggaggaggggaaagcactgtgtgtaaccggtaaactgagtgtgcgtgag
gaggaggaacccaagctcctttgtgacgatgtgcgtgcagcagccgatgcggaatctgca
cagcgacagccgccggtaccgcctgccgttcctgctgcgggcaagcacgtaaaaccggga
ctttatctgaaggtaccgaatgaaactgaccccgcatatctgcgagcaaagaagtatctg
gcagtttttgatggacgcacacagctgtatgttgtttttgcacaagaaaagaaaatgttc
cgcgccccggcttcctgcggcgtagacgtaaatgaagtacttttgcgggaactgcgcgga
cttctgggcaatacaaatgttgcgtacgtgcaataa
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