Caproicibacterium amylolyticum: H6X83_06950
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Entry
H6X83_06950 CDS
T07171
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
caml
Caproicibacterium amylolyticum
Pathway
caml03030
DNA replication
caml03430
Mismatch repair
caml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H6X83_06950
03430 Mismatch repair
H6X83_06950
03440 Homologous recombination
H6X83_06950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caml03032
]
H6X83_06950
03400 DNA repair and recombination proteins [BR:
caml03400
]
H6X83_06950
Enzymes [BR:
caml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H6X83_06950
DNA replication proteins [BR:
caml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H6X83_06950
DNA repair and recombination proteins [BR:
caml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H6X83_06950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
Rv2179c-like
DNA_pol3_a_NII
RNase_H_2
tRNA_anti-codon
DEDDh_C
tRNA_anti_2
DUF6454
DNA_ligase_ZBD
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
QNO19329
UniProt:
A0A7G9WKW7
LinkDB
All DBs
Position
complement(1447923..1452278)
Genome browser
AA seq
1451 aa
AA seq
DB search
MNTFGNFFGTYIDCSNLPEHLLSGELKQLHINAKERGITAEVALDGIVMRKVLYDAEKRI
SACKQLNLSRAQILPKYDSNLFSIDYYPELVVELKRREATINGTLLGSTAALENDTLTIE
LKHGGANLLNSRHADRILSQLIREEFGMNIRVTFTGRLEVDGEGEHYKEMQAHQTEKVYR
QEIVAQQEDYENSLAHTTEPRVIEVREGETLRPTILPDTARALYKTLPKAKPAPISTITP
DIGSLTVWGEIFSIESRLTRDKQHKIFSIAITDYTSSITLKVFESVQDCKTLDTLHNGMS
VIVRGDVEYDKYDHEIVMRPRGIGTVKQVQVEDKAPAKRVELHLHTNMSQMDAVNSASDL
ITRAAEWGHPAVAITDHGVAQAFPEAMNTAAALKKAGKHIKVIYGTEAYFVNDLVPAVTG
ESERELDGEFISFDLETTGLSPNQERITEIGAVRIRNGEIVESFDTFVDPERPIPPKITQ
LTGITDEMVSGAPSEDAAIQQFYDFCGKDAVLVAHNADFDTSFLRVSAERHNMDFPYVYI
DSIPMCRAMLVDIKNYKLDTVAKYLNLGNFNHHRACDDAAMLGQIFITLLQRLKEDTKAK
TVKEINTSLAAYHNKGSAKKIRSYHQIILVKNQTGLKNLYKLISMAHLQYYYRNPRIPKS
ELVKYREGLLIGSACEAGELYRAIFAGKPWNQLLEIADFYDYLEIQPNGNNMFMVRNGSV
PNVEKLQEFNKTIIKLAKALHKPVVATCDVHFLDPKDADYRKILQTAQGFDSSEEQAPLY
LRTTAEMLKEFAYLGKELAYEVVVKNTNLIADMCEEIQPIPSGVFPPFIDGAEQQLNDIC
WKRAKQIYGEPLPEIVKARLDRELGSINKHGFSVLYMTAQKLVADSEAHGYLVGSRGSVG
SSFVASMSGISEVNPLAPHYICPYCKYSEFITDGSYGSGFDLPPKTCPVCGSPLRQDGHN
IPFETFLGFDGDKTPDIDLNFSGEYQSGAHRYTETLFGKDHVFKAGTIATVADKTAYGYV
KKYQELNSVTLNNAEELRLAQGCTGIKRTTGQHPGGMVVVPRGFEIYDFCPVQHPANDQK
NDNVTTHFDFHSIHDTICKLDELGHDVPTIYRYLEEYTGIPVMSVSMSDPKVMSLFHSPA
ALGIAEEDIDCQTGTFSMPELGTPFVRQMLMDSQPKTFTDLLQVSGLSHGTDVWLGNAQD
LIKDGTCTISEVIGTRDSIMTYLLQKGLEPKMAFKIMEITRKGKATKLLTDDHINAMKEH
NVPQWYINSCFKIKYMFPKAHAAAYMIAALRLGWYKVHKPVEYYAAYFTVRGEDFDGATV
VKGRSAVRQRMHEIQQKGKEASAKEEAAFGTLQIVNEMLARGIGVLPIDLYKSDARKYLV
EDGQIRLPFASISGVGESAANALAAAKDGGAYISIDDLQARSKVSKSVIENLQEAGALNG
LPQSSQMTLFG
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctttggcaatttctttggtacatacattgactgttccaatttgccggaacac
ttgctttccggtgaactgaagcagctgcatatcaacgcaaaagaacggggaattactgcg
gaagtagcactggacggcattgtcatgcgtaaagtactgtatgacgcagaaaaacgaatt
tccgcctgtaagcagctgaatctttcacgtgcacagattctgccgaaatacgattccaat
cttttcagcattgactattatccagaactggttgttgaattaaagcgcagggaggcgaca
attaatggaaccctgcttggttctaccgcagctctggaaaatgatacgttgacaatcgag
ctgaaacatggtggtgcaaatttgctgaattcccgccacgctgaccgtatcctttcacag
ttgattcgtgaagaattcggcatgaatattcgtgtcacatttactgggcggctggaagtc
gatggcgaaggcgaacattataaagaaatgcaggcacaccagacagaaaaagtatatcgg
caggaaattgttgcgcagcaggaagattacgaaaattctttggcgcacactactgaacca
cgcgtaattgaagtacgtgagggagaaaccctgcgtccaacaattctgccagacacagcc
cgtgcgctttataaaacgctgccgaaagcgaagcctgcacctatcagcaccattacaccg
gatattggttctttaactgtctggggcgaaattttttctattgaatcccgccttacccgg
gacaaacagcataaaatcttttctattgctattacggactacaccagttctattacgctg
aaagtatttgaaagcgtccaggactgcaaaactctggatacgctgcacaacggaatgtca
gtgattgtgcgcggagacgttgagtatgataaatatgaccatgaaattgttatgcggccg
cgcggaattggtaccgtcaaacaggtgcaggtggaggacaaagcacctgcaaaacgagta
gagctgcatctgcataccaatatgtcacagatggatgctgtcaattccgcttccgactta
atcacccgtgcagcagagtgggggcatcccgccgttgcgattactgaccacggtgttgca
caggctttcccggaagcgatgaataccgctgctgctttgaaaaaagctggtaaacacatc
aaagtaatttacggtacagaagcctactttgtaaatgaccttgttcccgcagtaacaggg
gagagtgagcgggaacttgacggcgaatttatttcatttgaccttgaaacaaccggactt
tctcccaaccaagagcgtattacggaaattggtgctgtgcgcatccgcaacggcgaaatt
gtggaaagcttcgacacatttgttgatccggagcggccgattccaccaaagatcacacag
ctgaccggaattacagatgaaatggtttccggtgcacccagcgaagacgcagccatccag
cagttctatgatttttgtggtaaagacgcggtgctggtcgcacacaacgcggattttgat
acttcctttcttcgagtttcagcggaacgtcataatatggatttcccatatgtttatatt
gattcgattcccatgtgccgtgctatgctggtggacattaaaaactataaactagacacc
gtcgcaaagtatctgaatcttggtaactttaaccaccaccgtgcctgcgacgatgcggca
atgctggggcagatttttattacgctgctgcagcgcttgaaagaagataccaaagcaaaa
acggttaaagaaattaacaccagtttagcagcctaccacaataagggcagtgcgaaaaag
attcgctcataccatcagattattctggtaaagaatcagactggcctgaaaaatctgtac
aagctgatttccatggcgcatctgcagtattactaccgcaacccgcgtatacccaaaagc
gagctggtaaaataccgagagggactgctgattggcagcgcctgcgaagcgggcgaactg
taccgtgctattttcgccggaaaaccttggaatcagcttctggaaattgcagatttttac
gattatcttgaaatacagccgaacggcaacaatatgttcatggttcgaaacggctccgtg
ccaaatgtagaaaaactgcaagagttcaataaaaccattattaagttggcaaaggcactg
cacaaaccggtagttgccacctgtgacgtgcattttcttgacccgaaggatgcggattac
cgaaaaatcctgcagacagcgcagggttttgattccagtgaggagcaggcgccgctttac
ctgcgcaccaccgcggaaatgctgaaagaattcgcttatcttggcaaagaacttgcttat
gaagtggttgttaagaacacgaatctgattgccgatatgtgtgaagaaattcagccgatt
ccgagcggtgtttttccgccgttcattgatggtgcggagcagcaactgaatgacatttgc
tggaagcgtgcaaagcagatttacggtgaaccgctgcctgaaattgtgaaagcgcgtctc
gaccgtgagctgggttccattaacaagcacggtttctctgtgctgtatatgaccgcacag
aagctagttgccgacagcgaagcccatggctatctggttggctcgcgtggttccgtcggc
tcctcctttgttgccagtatgtccggtatttctgaagtaaacccgctggcgccgcactat
atctgcccttactgtaagtacagcgaattcattacagacggcagctatggttccggcttt
gacctgccgccaaaaacctgcccggtatgtggttcgcctctgcggcaggacggccacaat
attccgtttgaaacttttctcggctttgatggcgataaaacgccggatatcgacctgaac
ttctccggcgaatatcagtccggagcgcaccgctacacagaaaccctgtttggtaaagac
cacgtgttcaaggcaggcaccattgcaacagtggcggacaaaaccgcttacggctatgta
aaaaaatatcaggaacttaattctgttacgctgaacaatgccgaagaactgcgtttagca
cagggctgcaccggcattaagcgtactaccggccagcacccaggcggcatggttgttgta
ccgcgcggctttgaaatctatgatttctgtccagtgcagcatccggcaaatgaccagaaa
aacgacaatgttaccacacattttgatttccattctatccatgatacgatctgtaaattg
gacgaactaggacatgatgtgccgaccatttaccgctatctggaagaatacaccggcatt
ccggtaatgtccgtttccatgagtgacccgaaagtaatgagcctgttccattctcctgcc
gcactcggtatcgctgaagaagatatcgactgccagaccggcactttttccatgccggag
cttggcacaccgtttgtgcgccagatgctgatggattcacagccaaaaacgtttaccgac
cttttacaggtttccggcttgtctcatggtacagatgtgtggctgggcaatgcgcaggat
ttgattaaggacggtacctgcaccatttctgaagtaatcggaacacgagattccattatg
acttatctgctgcaaaaaggtttggaaccgaagatggcatttaaaatcatggagattacc
cgaaaaggcaaagcaacaaaattgctgacagatgaccatatcaatgctatgaaagaacat
aatgtgccgcagtggtacattaattcctgcttcaaaattaaatatatgttcccgaaagca
catgcggcggcttacatgattgccgccctgcggctgggctggtacaaagtacacaaaccc
gtagagtattacgctgcttactttacggttcgcggcgaagattttgacggtgcaaccgtt
gtaaaggggcgctccgcggtgcgccagcgtatgcatgaaattcagcagaaaggcaaggag
gcgagtgccaaggaagaagccgcatttggcacacttcaaattgtcaatgaaatgctggca
cgcggcataggtgttctgcccattgatttgtacaaatccgacgcgcgaaagtatctggtg
gaagacggtcagatccgcctaccgttcgcttctatcagcggcgttggggaatcggcggca
aacgcgctggcagcagcaaaagacggcggcgcgtatatttcgattgatgacctgcaggca
cgcagtaaagtaagcaaatctgtgattgaaaatctgcaggaagccggcgctttgaacggc
ctgccgcaaagcagccaaatgacccttttcggctga
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