Caproicibacterium amylolyticum: H6X83_08045
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Entry
H6X83_08045 CDS
T07171
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
caml
Caproicibacterium amylolyticum
Pathway
caml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H6X83_08045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caml03400
]
H6X83_08045
Enzymes [BR:
caml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H6X83_08045
DNA repair and recombination proteins [BR:
caml03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H6X83_08045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
PIF1
UvrD-helicase
T2SSE
Helicase_RecD
UvrD_C
AAA_22
AAA_29
NPHP3_N
SRP54
nSTAND3
DEAD
MeaB
TrwB_AAD_bind
AAA
PhoH
AAA_16
NTPase_1
HHH_3
ABC_tran
HHH_2
AAA_28
HerA_C
ResIII
CbiA
AAA_5
AAA_23
Thymidylate_kin
SLFN-g3_helicase
NACHT
Zeta_toxin
Mg_chelatase
KTI12
MobB
Motif
Other DBs
NCBI-ProteinID:
QNO16918
UniProt:
A0A7G9WE06
LinkDB
All DBs
Position
complement(1681233..1683455)
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AA seq
740 aa
AA seq
DB search
MEEQTLLEMAGTVERITFRNEKNGYTVLELNNGEELTTVVGSLPTAEPGDELHVVGTWTE
HPSFGRQFSAQIYERMQPTTSEAILLYLSSGAIKGIGRAMAKRVVETFGEHSLEILEKEP
DRLSQISGISKRKAQQIAEEYRQKLGIREVILGLKEFGVTPEEAVRVYRVYGPESVTQVR
QDPYCLCVEDVDLGFQRADAIAETLEHPADDPCRVRAGILYVLQHNVNNGHTYLPQDKLL
ATAASMLGIQPEQVHESYDELEHEASVVACTIHDRRVVYLPRLYHAEVFSAARLQMMMEY
PSQPIPDAEQAVDKFEAELGIAYAPEQKEAILAALSHGLLVLTGGPGTGKTTTLDAIIRI
LQKKGEKVLLAAPTGRAAKRMSELTGEEAKTLHRLLQVEWDETDSPVFARNEQKPLECDA
LIIDELSMVDICLFEALLRALPMGCRLVLVGDCDQLPSVGPGNVLGDLIASEMLPVVQLR
HIFRQSMQSLIVTNAHKIIAGEIPVLNDCKNDFFFMQRTEPTQISQTIQELCSKRLPATY
EFSPMTDIQVLSPSRKGELGTVQLNTVLQGVLNPHAAGKKEIKINSRLFREGDKVMQTKN
NYTLSWEKSDGTIGEGVYNGDIGIIREIDKAASALTVDMDDKVITYELETAAELELAYAL
TVHKSQGSEFPAVVMPMYPGPRPLYYRNLFYTAITRAKKLLILVGTQQTVRMMVENNRRT
RRYSGLREFLTGEAIFDENA
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcaaacgctgttggaaatggcaggtactgtggaacgaatcacgttccgaaac
gaaaagaatgggtataccgttctggaactgaataatggggaggagctgacaactgtggtc
ggctccctgcccactgccgagccaggggacgagctccacgttgtcggtacatggaccgag
catccatcttttgggcggcagttcagcgcgcagatttacgaacggatgcagcccacaact
tccgaagcaattttgctgtacctttcctccggtgcaattaaaggaatcgggcgtgctatg
gcaaagcgggttgtagaaaccttcggggaacattcgcttgaaatcttggaaaaggaaccg
gacaggctttcacagataagcggcatttcgaaacggaaagcacagcagattgcagaggag
tatcgccaaaaactcggtattcgtgaagtgattcttggtctgaaggaatttggagtaacc
ccagaagaagctgtgcgggtttatcgtgtttatggcccggaatcggtcacacaggtgcgg
caggatccgtattgcttgtgtgtggaggatgtagacctcggttttcagcgggcggatgcg
attgcggaaacactggaacatccggcagatgacccgtgcagggtgcgggcgggaattctg
tatgttttgcagcacaatgtcaataacggtcatacgtatctgccgcaggataagctgctg
gctaccgccgcttctatgttgggcattcaaccggaacaggtgcatgaaagctatgatgaa
ctggagcatgaggccagcgttgttgcctgcacgattcatgaccgtcgggtggtttacctg
ccgcgcctgtaccatgcagaagttttttctgctgcacgtctgcaaatgatgatggagtac
cccagccagccgattccagatgcggagcaagcggtagacaaatttgaagcggaacttgga
attgcatatgcaccggagcagaaggaagctattttggcggcactttcgcacggcctgttg
gtgctgaccggcggcccaggtacaggcaagacaacgacactggatgctatcattcgtatt
ttgcagaaaaagggtgaaaaggttttgctggcagcgccgaccggacgtgccgcaaaacgt
atgagcgagctgaccggtgaggaagcaaaaaccctgcaccgcctgctgcaggtggaatgg
gacgaaacggacagtcctgtttttgcccgcaatgagcagaagccgctggagtgtgacgcg
ctgattatcgacgaactttccatggtggacatctgcctttttgaagcgctgctgcgggcg
ctgcccatgggctgccggctggtgctggtgggggactgcgaccagttgccgagcgttggc
cccggcaatgtgctgggagatttaattgcgtctgaaatgctgccagtggtgcagctgcgc
cacatttttcgccaaagtatgcaaagtttgattgttaccaatgcacacaaaatcattgct
ggagaaattccggtacttaatgactgcaaaaatgatttctttttcatgcagcgtacggaa
cccacccaaatctcacagaccatacaggagctttgcagcaaacgtttgcctgctacttat
gagttttcgcctatgacggatatacaggtgctgtcgcccagccgcaaaggggagttgggt
acggtacagctgaataccgtgctgcagggtgtgctgaacccgcacgccgcagggaaaaag
gaaattaaaatcaatagccgtcttttccgcgaaggcgacaaagtgatgcaaaccaagaac
aactatacccttagttgggagaaaagtgacggtacgatcggtgaaggtgtttacaacggc
gacatcggcatcattcgggaaattgacaaagccgcttctgcgctgacggtggatatggat
gacaaagtgataacctatgagttggaaactgctgcagaattggaacttgcctatgcgctg
accgttcacaaaagtcagggcagtgagtttccagcggtagttatgccgatgtatccgggt
ccgcgcccgctgtattatcgaaatttattttatacagcgattacgcgcgcaaaaaagctg
ctgattctggttggcacacaacagactgtacgtatgatggttgaaaacaatcgccgtaca
cgccgctattctggtttgcgggaatttctgaccggtgaggcaattttcgatgaaaacgca
tga
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