KEGG   Caproicibacterium amylolyticum: H6X83_10630
Entry
H6X83_10630       CDS       T07171                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
caml  Caproicibacterium amylolyticum
Pathway
caml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:caml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H6X83_10630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caml03019]
    H6X83_10630
Enzymes [BR:caml01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     H6X83_10630
Messenger RNA biogenesis [BR:caml03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     H6X83_10630
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Phage_integrase CMS1
Other DBs
NCBI-ProteinID: QNO17392
UniProt: A0A7G9WFD0
LinkDB
Position
complement(2223738..2225285)
AA seq 515 aa
MDFQSLQIMQPILKNLEREGYKTPTPIQQQAIPQVLLGRDLFGCAQTGTGKTAAFAVPIL
QHLEENRVSGRPIRALILTPTRELAIQIFDNFRTYGKGLHQTCCVIFGGVSQNGQVQNLQ
RGTDVLVATPGRLNDLIGQGYIDLSQLEIFVLDEADRMLDMGFIHDVKKVIAQLPQQRQN
LMFSATLPKEIRALVDSILQNPVKISVTPPATTVEAIDQSVYYVDKGNKCRLLVWVLKDP
RISSALVFTRTKHGADRVVRDLTHAGISAAAIHGDKTQNARQAALSKFKNHQIRVLVATD
IAARGIDIDELSHVINYDIPEVPETYVHRIGRTARAGHSGTALSFCSINEKADFMGILRL
IKKEVPEVDEHPYPMQELVPMTREEMHQKQLERQQSARAARERRQQKETTGKSRRPERKQ
NAAAKKNEPAQQRQKAQAKKRPAQKANQSPRTEKPAQQPPQKQQPKAPRVKTGKEGRVPA
ERHESKHHEVRPELEKYLPKPLRKRPTDQPLKHHL
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggattttcaatcattacaaattatgcagccgattcttaaaaatctggagcgcgagggt
tacaaaacacccacaccgattcagcagcaggcaattccacaggtgctgctgggacgcgac
ttgttcggatgtgcgcagaccggaacaggaaaaacagctgcatttgcagtgccgattctg
cagcatttggaggaaaaccgggtcagcgggcgccccattcgtgcgctgatcctgaccccg
acccgcgaattggcaattcagatttttgacaatttccggacctacggcaaagggctgcac
cagacctgctgcgtcattttcggaggtgtcagccagaacggtcaggtgcagaacttgcag
cgcggtacggatgtgctggttgcgacaccggggcggcttaatgacctgattgggcagggc
tatattgacctttcgcagcttgaaatttttgtgctggatgaagcggaccgtatgctggac
atgggctttatccatgatgtaaaaaaggtgattgcccagctgccgcagcagcgtcagaac
ctgatgttcagcgcaactttgccaaaggaaattcgtgcacttgtggacagtattctgcag
aatcctgtgaaaatcagtgtaactcctccggcaacaacggttgaagccatcgaccaaagt
gtgtattatgtagataagggcaacaaatgccggctgctcgtctgggtgctcaaagacccg
cgcatttcctcggcgctggtgtttacacgtaccaagcacggtgctgaccgtgtcgtgcgt
gatttgacgcacgccggtatctccgccgctgccattcacggtgacaagacacagaatgca
cggcaggcggcactttccaagtttaagaatcatcagattcgggtgctggtcgctaccgat
attgccgcacgcggtatcgacattgatgaactttcccacgtaatcaactatgatattccg
gaagtgccggaaacgtatgtgcatcgcattggccgtaccgcgcgcgccggtcacagcgga
acggcgctttctttctgcagtattaatgaaaaagcggattttatgggaattttaaggctg
attaaaaaggaagtcccggaagtcgacgagcatccgtacccaatgcaggaactggtgcct
atgacgagagaagagatgcaccagaaacagctggagcgtcagcagtctgcaagggccgcc
agagaacgccgccagcagaaagaaacgacaggcaaaagccgccgtccggaaagaaagcag
aacgccgcagctaagaaaaacgagcccgcccagcagcgccaaaaagcacaggcgaaaaaa
cgccccgcgcagaaagcaaatcagagcccgcgtacagaaaaaccggcgcagcagccgccg
cagaaacagcagccgaaggcaccgcgtgtaaaaaccggaaaagaagggcgtgttcccgcc
gaaagacatgaatcgaagcaccatgaggtgcgtccggaactggaaaagtatctgccgaag
ccgctacgcaaacgtccgaccgaccagccgctgaaacaccatctgtaa

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