Caproicibacterium amylolyticum: H6X83_14245
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Entry
H6X83_14245 CDS
T07171
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
caml
Caproicibacterium amylolyticum
Brite
KEGG Orthology (KO) [BR:
caml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caml03016
]
H6X83_14245 (truB)
Enzymes [BR:
caml01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
H6X83_14245 (truB)
Transfer RNA biogenesis [BR:
caml03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H6X83_14245 (truB)
Prokaryotic type
H6X83_14245 (truB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QNO18052
UniProt:
A0A7G9WH90
LinkDB
All DBs
Position
complement(2951261..2952160)
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AA seq
299 aa
AA seq
DB search
MTGVLILDKPEGFTSFDAVAVLRRLTGERKIGHTGTLDPMATGVLPMLLGRATRALPFLA
DRHKTYEASFAFGVQTDTLDRTGKVQAEDGTPISREHLLNILPQFTGEIEQVPPMYSALR
KDGVRLYDLARQGKTVERQARRVTIDSLELLEYDEAARTGRLVMTCSGGTYVRTLCDDLG
RALGSHGMMTALRRTAAAGFSLADAVTLDTAKAMDQQELLAQVRPVESLFLDLPEVAVTL
PQAKRFSNGGGLALERLHPQTPFAGNCRVKDAQGRFLGLGTVDAEKGELAVARLFAQED
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtgtactgatactggacaaaccggagggctttacttcctttgacgcagtggct
gtactgcgcaggctgaccggcgagcggaaaatcgggcacaccggcacgctggacccaatg
gcaaccggtgtgctgcctatgctgctgggccgcgcgacccgcgcactcccgtttttagcg
gacaggcataaaacatatgaggcttcttttgcgtttggtgtgcagacggatactcttgac
cgcaccggcaaggtgcaggcggaggacggcacaccgatttcccgggagcatttactgaat
atacttccccaatttaccggagaaattgagcaggtgccgcctatgtacagtgcactgcgc
aaagacggcgtgcggctttacgaccttgcccggcagggaaaaacagtggaacggcaggca
cgcagggtgacgattgattctctggaacttttggagtacgatgaagccgcgcgaaccggc
cggctggtcatgacctgctccggcggcacctatgtgcgcaccttgtgcgacgaccttggg
cgggcacttggctcccatggcatgatgacagcactgcggcgcaccgccgctgctggtttt
tcccttgcggatgccgttacactggatacagcaaaagcaatggaccagcaggagctgctt
gcacaggtgcggccggtagagagcctttttctggatttgccggaagttgccgtaacactg
ccgcaggcaaagcgtttcagtaacggcggcggacttgcgctggagcgtctgcatccgcaa
acaccgtttgccggaaactgccgggtgaaagacgcgcaggggcggttcctcggcttgggt
actgtggatgccgaaaagggggagcttgcggtagcgcgcctttttgcacaggaggactga
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