Clinocottus analis (woolly sculpin): 137779542
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Entry
137779542 CDS
T10471
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cana03041
]
137779542 (dhx9)
03012 Translation factors [BR:
cana03012
]
137779542 (dhx9)
Enzymes [BR:
cana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
137779542 (dhx9)
5.6.2.6 RNA 3'-5' helicase
137779542 (dhx9)
Spliceosome [BR:
cana03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
137779542 (dhx9)
Translation factors [BR:
cana03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
137779542 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
nSTAND3
RHA1_ro05818_N
AAA_22
AAA_19
Motif
Other DBs
NCBI-GeneID:
137779542
NCBI-ProteinID:
XP_068423523
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MADIKNFLYAWCGKKKLTPSYDIRAAGNKNRQKFMCEARVDGYSYTGMGNSTSKKDAQTN
AARDFVNYLVRTGEMSAAEVPAAGVLEVSAPGGDQPDGGAGGAAGGAAFGSLPSSGPLPP
HLVLKTEKEEAGSCGPIPGVTGLGYSGGGGAEWERGANLKEYYAKRDEQEAQATLESEEV
DLNASLHGNWTLENAKARLNQFFQKEKTSAEYKYSQVGPDHNRSFIAEMQLFVRPLGRRI
TAREHGSNKKLAAQSCALSLVRQLYHLGVLEAFSGLTKKKEGETLEAFQVNVSADLQQQL
AAVVQELGVHVPPAPADPSQSVSLVQAKLATFEPSQRQSAAGVVPWSPPQVNWNPWTSCN
IDEGPLAFCTPEQISSDLQEELMHQLEHDEHLQKILCEREQLPVRQFREEVLAAVESNAV
VIIRGATGCGKTTQVPQYLLDRFIQSGRASDCNIVVTQPRRISAVSVAERVAYERGEEVG
KSCGYSVRFESVLPRPHASVLFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLMVV
LRDVVQAYPQVRILLMSATIDTSMFREYFFNAPVIEVFGRTFSVQEYFLEDCIQMTNFVP
PPLDRKKKDKDEDGGEEDTNCNVLCGPDYTLETKRSMAQVSEKETSFELVEALLRYLETL
QVSGAVLVFLPGWNLICSMQRHLESNPHFGSSRYRILPLHSQIPREEQRRVFEPVPDHIR
KVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNFATVWASKTNLEQRRGRAGR
VRAGFCFHLCSRARFERLETHMTPEIFRTPLHEVALSIKLLRLGAVGHFLSKAIEPPPLD
AVIEAEHTLRELDALDSNDELTPLGRVLARLPIEPRLGKMMIMGCIFHVGDAMCTISAAS
CFAEPFVSEGKRLGFVHRNFSGSRFSDHVALLSVFQAWDDVRISGEDAEIRFCEHKRLNM
STLRMTWEAKVQLKDILVSAGYPEECLVPQVFNTVGPDMNLDVVVSLLAFGSYPNVCFHK
EKRKILTTEGRNALIHKSSVNCPFSAHDMAYPSPFFVFSEKIRTRAISAKGMTLVSPLQL
LLFACKKISSNGDVVELDDWIKLRVPHEVAGGIAALRAGLEALVVEVTKDPEYITQMDQS
NQQLLNLIRLTSRPTAAGLHMMSSQRTGDGPRPPKMARFDGGGGGGGGGGYRGGYGGGGG
GGGYRGGGGYRSGGGYRGGGGYGGGGRGGYGGGGGYGGGGRGGYGGGGGYGGGGRGGYGG
GGGYGGGGGGGYGGGGYGGGRGYRGGGY
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggctgacatcaagaacttcctgtacgcctggtgcgggaagaagaagctgactcccagc
tacgacatccgagctgccggcaacaagaaccggcagaagttcatgtgcgaggcccgcgtg
gacggctacagctacaccggcatgggcaactccaccagcaagaaggacgcgcagaccaac
gccgcccgcgacttcgtcaactacctggtccggaccggagagatgagcgcggccgaggtc
ccggctgccggggtcctggaggtgagcgctccaggtggagaccaacctgatggaggagca
ggaggagcagcaggaggcgcggccttcgggagcctcccctccagcggtcctctgcctcct
cacctggtgctgaaaacagagaaagaagaggccggtagctgcgggccgataccaggagtg
actggactcggctactcaggaggaggaggagcagagtgggagcgaggagccaacctaaag
gagtactacgccaagagagacgaacaggaagcacaggcgactctggagtcggaggaggtg
gacctgaatgcgagtcttcatggtaactggactctggagaacgcaaaggcccgtctgaac
cagttcttccagaaggagaaaaccagcgctgagtataaatacagccaagtgggaccggac
cacaacaggagcttcatcgctgagatgcagctgttcgtcagaccgctgggcagaaggatc
acggctcgggagcacggctccaacaagaagctggcggcgcagtcgtgcgcgctgtccctc
gtgaggcagctgtaccacctgggggtgctggaggccttctccggcctcaccaagaagaag
gagggagaaaccctggaggcgttccaggtcaacgtgtctgcagacctgcagcagcagctg
gcagccgtggtccaggagctcggagtccacgtcccgccggcccccgcagacccctcccag
tccgtgtctctggtccaggccaagctggcgaccttcgagccgtcgcagcggcagagcgcg
gcgggcgtggtgccctggtcgccgccgcaggtcaactggaacccctggaccagctgcaac
atcgacgagggaccgctggccttctgcactccggagcagatcagcagcgacctgcaggag
gagctgatgcaccagctggagcacgacgagcacctgcagaagatcctgtgtgagcgggag
cagcttcctgtgaggcagttcagggaggaggtgctggcggcggtggagagcaacgcggtg
gtgatcatcagaggagcgacgggctgcgggaaaaccacgcaggtgcctcagtacctgctg
gaccgcttcatccagagcggccgggcctcggactgcaacatcgtggtcacgcagcccagg
cgcatcagcgccgtgtcggtggccgagcgggtcgcctatgagaggggagaggaagtgggg
aagagctgcggctacagcgtccgcttcgagtccgtcctgcctcgaccgcacgccagcgtc
ctcttctgcaccgtcggtgttctgttgcggaagctggaagcaggaatcagaggaatcagt
cacgtgatcgtcgacgagatccacgagcgagacatcaacacggacttcctgatggtggtc
ctcagggacgtggtccaggcctacccgcaggtccgcatcctgctcatgtcggccaccatc
gacacctccatgttcagggagtacttcttcaacgcccccgtcatcgaggtgttcggacgc
accttctctgttcaagagtatttcctggaagattgcatccagatgaccaacttcgtccct
ccgccgctggaccgcaagaagaaagacaaagacgaggacggaggagaggaggacaccaac
tgcaacgtgctgtgcgggccggactacacgctggagaccaagcgctcgatggctcaggtg
agcgagaaggagacgtccttcgagctggtggaggcgctgctcaggtacctggagacgctg
caggtgagcggagccgtgctggtgttcctgccgggatggaacctcatctgctccatgcag
agacacctggagagcaacccacactttggaagtagccggtaccggatcctgccgctccac
tcccagatcccccgtgaggagcagaggagggtctttgaaccggttccagaccacatcagg
aaggtgattctgtccaccaacatcgcagagaccagcatcaccatcaacgacgtggtctac
gtcatcgactcctgcaagcagaaggtgaagctcttcacgtctcacaacaacatgactaac
ttcgccaccgtctgggcctccaagaccaacctggagcagcggagaggccgagcaggccga
gtcagagccgggttctgcttccacctctgcagccgggcccgctttgagaggctggagact
cacatgactccagagatcttccggactccgctccatgaagtggctctgagcatcaagctg
ctgcgactcggagccgtcggtcacttcctgtctaaagccatcgagccgccgccgctggac
gccgtgatcgaggccgagcacacgctgagagaactggacgctctggactccaacgatgag
ctcactcctctgggtcgggttctggctcgactccccatcgagcctcgtctggggaagatg
atgatcatgggctgcatcttccacgttggagacgccatgtgcaccatctcggccgcctcc
tgcttcgcggagccgttcgtcagcgagggcaagcggctcggcttcgtccacaggaacttc
tctggcagccgcttctcggaccacgtggccctgctgtccgtgttccaggcctgggacgac
gtgaggatcagcggcgaggacgcagagatccgcttctgtgagcacaaacgcctcaacatg
tccacgctgaggatgacctgggaggccaaggtccagctgaaggacatcctggtctccgcc
ggctacccagaagagtgtctggtgccccaggtcttcaacacggtggggccggacatgaac
ctggacgtggtggtgtctctgctggcgttcggctcgtatcccaacgtgtgcttccacaag
gagaagaggaagatcttgaccacggagggccgcaacgcgctgatccacaagtcctcggtc
aactgccccttcagcgcccacgacatggcgtacccctcgcccttcttcgtgttcagcgag
aagatcagaaccagagcgatctcggccaaagggatgacgctggtgagtcctctgcagctg
ctgctgttcgcctgcaagaagatcagctccaacggagacgtggtggagctggacgactgg
atcaagctgagggtccctcacgaggtggcggggggcatcgccgccctgcgcgccggcctg
gaggcgctggtggtggaggtcactaaagaccccgagtacatcacacagatggaccagagc
aaccagcagctgctgaacctcatcagactcacatccagacccactgctgcaggactgcac
atgatgagcagccagaggacgggtgacggtcctcgacctccaaagatggcacgatttgac
ggaggaggaggaggaggaggaggtggaggctacagaggaggatatggaggaggaggagga
ggtggggggtacagaggaggcgggggctatagaagtggaggagggtacaggggaggagga
gggtatggaggaggaggaagaggagggtatggaggaggtggagggtatggaggaggagga
agaggagggtatggaggaggtggagggtatggaggaggaggaagaggagggtatggagga
ggtggagggtatggaggaggaggtggaggagggtatggaggaggaggatatggaggaggt
cgaggatacagaggaggaggttattaa
DBGET
integrated database retrieval system
