Clinocottus analis (woolly sculpin): 137780876
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Entry
137780876 CDS
T10471
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana00310
Lysine degradation
cana01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
137780876 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cana03036
]
137780876 (setdb1b)
Enzymes [BR:
cana01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
137780876 (setdb1b)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
137780876 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
137780876 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_4
Tudor_5
DUF5604
SET
MBD
Pre-SET
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
137780876
NCBI-ProteinID:
XP_068425300
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MDGRMEISDGMEVDGWDSTMEEELGISLDELKKWIDEAVEKSEIVQKKKAQLTELKEWVE
QKEEEEARTGSLLNDANKSILECEKLVKATYHKSGLVYQESSSEEEGGGGGLLSSEVIEI
DDDDDDDVIAVGCLVPPKKPGTPCKDPTLNEASTALQKTSQQVHKLVQMVSKPSPGAPLL
RSPQSGIHASVPAVFVSQIQSQSMTQPNPNATEDELRVGMMILGKKRTKTWHKGVLVATS
PVGNGILKYKVKFDKGKSLLSGNHVAFEYNPTLEILYVGARVVAKYKDGTLVWLYAGIVA
EMPNNKNRMRFLIFFDDGYASYVTLPDLHPVCRPLKRTWEDIEDASCRDFIEEYITAYPS
RPMVLLKVGQIIKTEWEGTWWKSKVEEVDGSLVKILFLDDKRSEWIYRGSTRLEPMFNLK
MTSANTQEKKLAGQQRSRPNMGVMRSKGPVVQYTSDGHLGASPVKTLQGSPSQSPQTPQQ
QRPPPQQPQQPQQPQQPQQIQQPQQIQQIQQIQQIQQIQNIQPIQNIQPIQQIQQIQPIQ
QIQPIQQIQPIQQIQQIQQIQQIQQIQPIQQFQQFQQFQQIQQIQQPIQPPRVDNKHQMA
KKSTSPFVPGVGGTHASKIMMQALSPVPSDLTSARLLSYQRLPTLAAAPPPVTHTMATVP
HQPSYRAPTDRIFYLAHTCQPACLNRVRPAKSDMHRGKNPLLTPLLYDFRRMTGRRKVNR
KMSFHVIYKAPCGLCLRNMAEIQHYLFQTRCDFIFLEMFCLDPYVLVDRPFQPQRPFYYI
PDITSGKEDIPLSCVNEIDSTPPPEVAYSKERIPEDGVYINASPDFLVGCDCTDGCRDKS
KCSCHQLTLQATGCTPGAQINPNAGFLHKRLEECLPTGIYECNKRCKCCSHMCTNRLVQH
GLQVRLQLFKTQNKGWGIRCLDDVAKGSFVCIYAGKILTDDFADREGLEMGDEYFANLDH
IESVENFKEGYESEAHCSDSEGSGVDMSRLKIQPSALVSANTAGKPIKKAQNPSSSGDSN
EDDDKDSKSEEQSDSSDDTFVKENYFSSSSVWRSYTTRGQVKGNKEGSQDSKDGLNASAR
GTDDDKPPSMPEETGKSKVASWLTSQGIKKESGDGKSQVKSEAGKKQEVMTLSDSDEVQT
ISSGSDDNKEREKVTLGVTKKQVAVKSTRGIALKSGHGMMVKTGTAGGAGGPGGHAGKTG
QQGQTGGGGDNAHKNTRLFFDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHD
LRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKVLLCCCGSTECRGRLL
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaggatggaaatcagcgatggaatggaagtggacggctgggactctaccatg
gaggaagagctgggcatttctctagatgagctgaagaagtggattgatgaagcagtcgag
aagagtgagattgtgcagaagaaaaaggctcagctgacagagctcaaggaatgggtggaa
cagaaagaagaagaggaggcgaggacaggcagtcttctcaacgatgccaacaagtccata
ttagagtgtgagaagcttgtgaaggcaacttaccacaagagcggtctcgtttatcaagag
agcagctcagaggaggagggtggtggaggaggcttgctgtcctctgaggtcatcgagata
gacgatgatgatgacgatgatgtcattgctgttggctgtttggttcctccaaagaagcct
ggcacaccttgcaaagatccaacgttaaatgaggcctccacagcactacagaaaacatct
cagcaggtgcataagttggtccaaatggtcagtaagccctcaccaggtgctccactgctt
cgatctccacagtcaggtattcatgcttcagtaccagccgtgtttgtatcccaaattcag
tctcagtccatgacccagccgaatccaaacgcgacagaagatgagctgagagtcgggatg
atgattttgggaaagaaacgcaccaagacctggcacaaaggcgtccttgttgctaccagc
cctgtcgggaacggtatactaaagtataaagtgaagtttgataaaggaaagagtctgctg
tctggaaatcatgtggctttcgagtataaccccacactggagattctgtacgtcggagct
cgtgttgtcgccaagtacaaggacggcactctggtttggctctatgctggaatagtagca
gagatgccaaacaacaagaatcgtatgaggtttttgatcttctttgatgatggctatgct
tcatatgtgacactacctgacctccacccagtttgcagaccattaaagcgtacctgggag
gacatagaagatgcatcgtgtcgcgacttcattgaggagtacatcactgcatatcctagc
aggccaatggtgctcctaaaggttggtcagatcatcaagaccgagtgggagggaacctgg
tggaagagcaaagtggaagaggtggatggaagcttggtcaagatcctctttttggatgac
aagaggagtgagtggatttatagaggctctacccggttggagccaatgtttaacctgaag
atgacctcggccaatacccaagagaagaagctggctggccagcagaggtcacgacctaac
atgggggtgatgaggagtaaaggtccagtagttcaatacaccagtgatgggcatcttgga
gcctctcccgtcaaaacgctgcaaggctcacccagccagtcgccacagacaccacaacaa
cagcgtcccccgccccaacagccccaacagccccaacagccccaacagccccaacaaatc
caacagccccaacaaatccaacaaattcaacaaatccaacaaattcaacaaatccaaaat
attcaacccatccaaaatattcaacccatccaacaaatccaacaaattcaaccaatccaa
caaattcaaccaatccaacaaattcaaccaatccaacaaatccaacaaatccaacaaatc
caacaaattcaacaaattcaaccaattcaacaattccaacaattccaacaattccaacaa
attcaacaaattcaacagccgattcagcctccacgtgttgacaataaacatcagatggca
aagaagagtacttctccatttgtcccaggggtgggaggcactcatgcctcgaaaatcatg
atgcaagctctttctcccgttcccagcgacctcactagtgcaagacttttgtcgtatcag
agactgcccactctggctgccgcaccccctcctgtgacccacacgatggccaccgtccct
caccagccctcataccgtgccccgacggaccgcattttctaccttgcacacacttgtcag
cccgcatgtctgaatcgtgtccgacctgcaaagtctgacatgcaccgaggaaagaacccc
ctcctcacacctttactttacgacttcagacgcatgacgggaagacggaaagtcaaccgc
aagatgtccttccatgtgatctacaaggctccgtgtgggctttgcctgcgcaacatggca
gagatccagcactacctcttccagacacgctgtgattttatattcttagagatgttctgt
ctcgacccttatgtgctcgtggaccgaccatttcagccgcagcggccattctattacatt
cccgacatcacgagtggaaaagaggacatcccactctcctgcgtcaacgagattgattcc
accccgcctcctgaagtagcttacagtaaagagcgtattcctgaagatggagtatacatc
aacgccagtccagacttcctggttggatgcgattgcaccgacggctgccgcgacaagtcc
aaatgctcttgccaccagctgacccttcaggctactggttgtacaccgggcgcacagatc
aacccaaatgctgggtttttgcacaaacgattagaggagtgcctcccaacggggatctac
gagtgtaacaagcggtgcaaatgctgcagtcatatgtgcaccaaccggttggtgcaacat
ggcctgcaagtgcgcctccagctcttcaagacccagaacaaaggctggggcatccgctgt
ctggacgacgtggccaagggctcttttgtctgcatttatgctggtaaaatcttgaccgac
gactttgctgacagagaaggcctagagatgggtgatgagtatttcgccaatctggaccac
atagagagtgtggagaacttcaaagagggttatgagagtgaggctcactgttcggatagc
gaggggagcggtgtggacatgtcgagattaaaaatccaaccatcggctttagtatcggcg
aacactgctgggaaaccaatcaaaaaggcccaaaacccaagctcatcaggggacagcaat
gaagacgatgacaaggattcaaagagcgaagagcaaagtgacagttcagatgacacgttt
gtgaaggagaactatttcagctccagctctgtgtggaggagttacaccacacgtggtcag
gtcaaaggcaacaaggaagggagtcaagacagtaaggatggattgaacgcgtctgccaga
ggaactgatgacgataagccaccgtccatgcccgaagagacgggcaaaagcaaagtggct
tcctggctcaccagccaggggataaagaaggaatccggagacggcaagagtcaagtgaag
tcagaagcggggaagaagcaggaagtgatgactctctctgacagcgatgaggttcagacc
atcagctctggatctgatgacaacaaggagagagagaaagtgaccctgggtgtgactaag
aagcaggtagcagtgaaatcaacacgtggcatcgctctcaaaagcggccacgggatgatg
gtgaaaacgggtacagctggaggcgcgggagggccaggaggtcatgcagggaaaactgga
cagcagggtcagactggaggaggtggggacaatgctcacaaaaacacccgcctgttcttc
gacggcgaagagtcctgctacatcattgatgccaagttggaaggaaaccttgggcgttac
ctcaatcacagctgtagtccaaacctttttgtccagaatgtgttcgttgacacgcacgac
ttgaggtttccctgggtggcgttctttgccagcaagcggatccgggccggcacagagctg
acctgggactacaactacgaggtgggcagtgtggaggggaaggtgctgctctgctgctgc
ggatccaccgagtgccgaggaagactgctgtga
DBGET
integrated database retrieval system
