KEGG   Clinocottus analis (woolly sculpin): 137781200
Entry
137781200         CDS       T10471                                 
Symbol
si:dkey-199f5.8
Name
(RefSeq) beta-1,4-galactosyltransferase 3
  KO
K07968  beta-1,4-galactosyltransferase 3 [EC:2.4.1.90 2.4.1.38 2.4.1.-]
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana00510  N-Glycan biosynthesis
cana00513  Various types of N-glycan biosynthesis
cana00514  Other types of O-glycan biosynthesis
cana00515  Mannose type O-glycan biosynthesis
cana00533  Glycosaminoglycan biosynthesis - keratan sulfate
cana00601  Glycosphingolipid biosynthesis - lacto and neolacto series
cana01100  Metabolic pathways
Module
cana_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
cana_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:cana00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    137781200 (si:dkey-199f5.8)
   00513 Various types of N-glycan biosynthesis
    137781200 (si:dkey-199f5.8)
   00515 Mannose type O-glycan biosynthesis
    137781200 (si:dkey-199f5.8)
   00514 Other types of O-glycan biosynthesis
    137781200 (si:dkey-199f5.8)
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    137781200 (si:dkey-199f5.8)
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    137781200 (si:dkey-199f5.8)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:cana01003]
    137781200 (si:dkey-199f5.8)
Enzymes [BR:cana01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     137781200 (si:dkey-199f5.8)
    2.4.1.90  N-acetyllactosamine synthase
     137781200 (si:dkey-199f5.8)
Glycosyltransferases [BR:cana01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   137781200 (si:dkey-199f5.8)
  Glycolipid
   137781200 (si:dkey-199f5.8)
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C
Other DBs
NCBI-GeneID: 137781200
NCBI-ProteinID: XP_068425897
LinkDB
Position
Unknown
AA seq 389 aa
MISIQSKWRYLFMFLGIQLVVMALLSREGYQKRVSYFIGIFRKPDTTGLSGRNHTAASIA
GGDVYANLSHLAKTHSQGEEMPYCPKTSPFIGGPIHVSFPSGLTIAQVQRKNPLVVRGGR
YRPPDCEARHRTAIIIPHRHREHHLKFLLYYLHPFLQRQQLNYGIYVIHQAGNYTFNRAK
LMNVGFREAMKEEDWDCLFFHDVDLIPEDDRNTYVCDSNPKHAAIAMDKFGYKLPYKMYF
GGVSALTPLHYLKMNGFPNNYWGWGGEDDDIGTRVTLGGMYITRPSVKVGRYKMIKHKLD
KGNGVNPKRFNMLAKTRQTWKSDGMNTAEYETISRQYLPLYTNITVNIGTEAGLHAPPPP
AKAAVKKTAKDPAKLEEGHREKRSAPRDR
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgatcagcatccagtccaaatggcgctaccttttcatgttcctgggcattcaactggtg
gtcatggcactgctgtcccgagagggataccagaagagggtttcctacttcattggcatc
ttccgaaagcctgacaccactggtttgtcaggccgcaaccacacggcagcgagcatcgct
ggaggggatgtatatgccaacctctcccatctcgccaaaactcatagccagggagaagaa
atgccttactgccctaagacgtccccttttattggtgggccgatacacgtcagctttcca
tcggggctcacgattgcacaggttcagaggaaaaaccccctggtggtgcgaggcggacgc
tacaggccgcctgactgtgaggcgaggcaccgaacagccatcattattccccacagacac
cgagaacaccacctgaagttcttactatactacctgcatccttttctccagagacagcag
cttaactatggaatttacgtcattcaccaggccggaaactacacttttaacagggccaag
ctgatgaatgtgggtttccgggaggcgatgaaggaggaagactgggactgtcttttcttc
catgatgtggacctcatccccgaggacgatcgcaacacctacgtctgcgactccaacccg
aagcatgccgccattgccatggacaagtttggctacaagcttccgtacaagatgtacttt
ggaggagtgtcagctctgacgccactgcactacctcaagatgaatggctttcccaacaac
tactggggctggggtggagaggacgacgacattggaaccagagtgaccctgggggggatg
tacatcactcgtccatcggtgaaagtcggccgttacaagatgattaaacacaagctggac
aaaggcaatggtgtgaaccctaagaggttcaacatgctggccaagacgcgtcagacctgg
aagtcggatgggatgaacacagctgaatatgagacaatctcccggcagtacctgcccctt
tacaccaacatcactgtcaacatcggcaccgaggccggtctacatgcaccaccacctcct
gccaaagctgcagtgaaaaaaactgccaaagacccagccaaactcgaagagggccacaga
gagaaaaggtctgcaccaagagaccgctaa

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