Clinocottus analis (woolly sculpin): 137781227
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Entry
137781227 CDS
T10471
Symbol
si:ch73-22o12.1
Name
(RefSeq) nectin-2 isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03266
Virion - Herpesvirus
cana04514
Cell adhesion molecule (CAM) interaction
cana04517
IgSF CAM signaling
cana04520
Adherens junction
cana05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
137781227 (si:ch73-22o12.1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
137781227 (si:ch73-22o12.1)
04517 IgSF CAM signaling
137781227 (si:ch73-22o12.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
137781227 (si:ch73-22o12.1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137781227 (si:ch73-22o12.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cana04515
]
137781227 (si:ch73-22o12.1)
04090 CD molecules [BR:
cana04090
]
137781227 (si:ch73-22o12.1)
Cell adhesion molecules [BR:
cana04515
]
Immunoglobulin superfamily
Nectin family
137781227 (si:ch73-22o12.1)
CD molecules [BR:
cana04090
]
Proteins
137781227 (si:ch73-22o12.1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
ig
C2-set_2
Ig_3
Ig_2
I-set
TM_ErbB1
Ig_VSIG10L2_N
Ig_PVRIG
GRP
DUF4342
Opalin
Motif
Other DBs
NCBI-GeneID:
137781227
NCBI-ProteinID:
XP_068425947
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MARRDARNWHDCSKMIGLLLVASILIEHGVSGQRVKVEPEVLSYPGQTVNLRCAFTDAAG
SQLTMVTWIYEPKDGERINIAVFHPNFEASYPDSPVKGRVSFTPSPPNLANPSIEISNVR
MTDEGKYICEYATYPRGNEQGITQLIMLAKPQNSASIVTVLAGDKPVVVARCESADGRPA
AEITWVTTANGNATTVSKPGVDNTMTVSSEYRMIPTAADNGKDLSCVVAHRTQVKPESFP
LKLAVQYIPRVTIVGYDNNWYVGRTNVVLTCQANGNPAPLTTQWKTMSGEKPDTVQITDN
VLKVLKVDDAVNTTFVCEVRNRIGTGKDQVTVIVREPSVNPSNAGVVAGAVIGSLLALLL
VTALIAVLVTRSRRQQQGYRANGGSDMKTRIFGGGKKASKNGTGGGAGGGVGGGNNNGPI
YNYDESSPHQGLGEKNNHHQPLTIGGRPEVVATTPTAQDILLSNELDDVERRKFDELEED
ERYDHFTGGGAPILQLRPPHDQDDMIGDYMDDDMESQRDGSVISRTAVYV
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacgtgacgcccgaaattggcacgactgctccaaaatgatcggactgctcttg
gtcgcgtcgatacttattgaacacggagtgtccggtcagcgggtgaaggtggagccagaa
gtgttgtcgtatcctggccaaactgtcaacctgcgctgcgccttcaccgatgccgctggg
agtcagctcacaatggtcacgtggatctacgagcctaaagacggagaaaggatcaacatc
gctgtgtttcaccccaactttgaggccagctaccccgactcgcccgttaagggcagagtc
agcttcacacccagtcctccaaacctcgccaatccctccatcgagataagcaatgttagg
atgaccgatgaggggaagtacatctgcgagtatgccacctaccccagaggcaacgagcaa
ggcatcacacagctgatcatgctagctaagcctcagaactcggcctccatcgtcacagtg
ctggcaggcgataagccggttgttgtggcccgctgcgagtctgctgatggccgccccgct
gccgagatcacctgggtgaccacagccaacggcaacgcaacaacggtgtcgaagccaggg
gtcgacaacaccatgaccgtcagcagcgagtaccgcatgattcccacagcagcagacaac
gggaaagacctcagctgtgtggtggcgcacaggacccaggtcaaaccagagagcttcccg
ttgaagctagctgttcagtacattcctcgggtgacaatagtgggttatgataataattgg
tatgtgggtcgtacaaatgtggtgctcacctgccaggctaacggaaaccctgctccattg
accacccagtggaagacgatgtcgggagagaagccagacacggtgcagatcacagacaac
gtgctgaaggtcctgaaggtggacgatgctgtcaacaccacttttgtctgcgaggtcagg
aaccgcatcgggaccggcaaggaccaggtcacggtcattgttagagagccctcagtgaac
ccatccaatgccggcgtggtggcaggcgctgtgatcggctccctgctggccctccttttg
gtcaccgctctcatcgccgtgcttgtcacccgcagccgcaggcaacagcagggttaccgc
gccaatggcggcagtgacatgaagacgcgcatatttggcggcggcaagaaggccagcaag
aacggcacgggcggaggcgcaggcggtggcgtcggaggcggcaacaacaacggccccata
tacaattacgacgagagctcaccccaccagggcctcggagagaaaaacaaccaccaccag
ccgctcaccattgggggtcggcctgaagttgttgccactacacccaccgcccaagatatc
ctgctgagcaatgaattggatgacgtggaaaggaggaagtttgatgagctagaggaggac
gagaggtatgaccacttcactggaggaggggcccccatccttcagcttcgcccaccgcat
gaccaggatgatatgattggagattacatggatgatgacatggagtcccagcgggatggc
tccgtcatctcacggactgctgtttacgtatag
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