Clinocottus analis (woolly sculpin): 137785412
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Entry
137785412 CDS
T10471
Symbol
otofa
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
cana Clinocottus analis (woolly sculpin)
Brite
Membrane trafficking [BR:
cana04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
137785412 (otofa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137785412
NCBI-ProteinID:
XP_068432705
LinkDB
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Position
Unknown
AA seq
2051 aa
AA seq
DB search
MMALMVHLKTADHLRGKGDRIAKVTFRGLTFYSRVAENCEEVAQFNEVFRWPIASRLDGN
EMLEIQVYNYSKVFSNRLVGTFCMVLQKVAEEGHLELTDTLIDDNNTSIKTSVTIEIKYQ
SMDGTVGVWSDGEFLDVPEDRDGMFAFETDSLLSGQSHGSGTSPGRSLQGSIPTFRKAGK
GVFSAMKLGKIKSSKDDHKRGDEPAVLDMEDMDRKAMRLAGVQDPDTISLASVTAVTTNV
SNKRSKPDIKMEPGSGRPVDYQISITVIEARQLIGLNMDPVVCVEIGDDKKYTSMKESTN
CPYYNEYFVFDFHVPPDVMFDKIIKLSVIHSKNLLRSGTLVGTFKMDVGTVYSQPEHQFY
HKWSILSDPDDITAGCKGYVKCDIAVVGKGDNIKTPHKANETDEDDLEGNLLLPEGISAE
RQWARFYVKIYRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVQVQFAGQKGKTSVQRSS
YEPIWNEQVVFTELFPPLCKRLKVQIRDSDKVNDVAIGTHFVDLRKISNDGDKGFLPTLG
PAWVNMYGSTRQYTLMDEHQDLNEGLGEGVSFRARLLLSIAVEILDTTSPELMSSTEVQM
EGVSNISESATGKIDEFFLFGSFLEATMIDRKIGDKAISFEITIGNYGNQIDGVSKPSSS
KKKKKDGENEEEENELIQNSSEDEADEDRDLVSVSSTPPMKPVITDRNYFHLPYFEKKPC
VYIKSWWQDQRRRLYNSNMMDKIADKLEEGLNDVQEIIKTEKAFPERRLRGVLEELSVGC
SRFVILANKDVNQAGRTKLDRERLKSCMREMDSMGQQAKQIRTQVKKNTVRDKLKLVQNF
LQKLRFLADEPQHSIPDVFIWMMSNNKRIAYARIPSKDILYSIVDEETGKDCGKVKAVFL
KLPGKKGFGPAGWTVQAKLELYLWLGLNKQRKDFLNGLPNGFEEIKSAKMDHCLQSVPPV
SLVYNMKQVFQLRAHMYQARSLFAADNSGLSDPFARVFFSTHSQVTEVLSETLCPTWDQL
LVFDDVELFGEASELRDDPPIIVVEIYDQDTVGKAEFIGRTFAKPTIKMCEEYYGPPRFP
PQLEYYQIYRGNCVAGELLAAFELLQIPFDVEAIRRALIAVHNFAVPQIKIGQGGRTDLP
PLEGPTDSERGPILPVPLGIRPILSRYRIEVLFWGLRDLKRINLAQVDRPRVDIECAGRG
VQSVLIQNYKKNPNFSILVKWFEVDLPENELLHPPLNIRVVDCRAFGRYILVGSHAVSSL
RRFIYSTPDKTSNNWATAAKLMNGYMVLANGGSEPRSSPSLSSRTFSRPAGDILVNMDGE
PPLRKMDTVVKLDATSDAVVKVDMTEEESDKDKKKKKKKKKGVEEEDETDERVLDWWSKY
FASIETLKETLRAQEAAQAEAEEREDLEIAAEAAEIKPDDLLLKGSKTKEKGKEKRSSKD
KKKAQAADGSDKRPVKAKVDELMVYNKELESEYGNFEDWLHTFNLYRGKAGDDDERALDD
DRIVGRFKGSLCMYKLPVSEEITRDAGFDPNMGMFQSIPHNDPINVLVRVYVVRATDLHP
ADINGKADPYVVIKLGKSEVKDKENYISKQLNPVFGKSFDIEATFPMESMLTVSVYDWDL
VGTDDLIGETKIDLENRFYSKYRATCGISSHYSVHGYNVWRDPLKPSQILAKLCKDGKID
GPHYGPGGKVKVANRIFLGPTEMEDENGLKKQTEEHLALTVLNHWEEIPRVGCKLVPEHV
ETRPLLNPDKPGIEQGRIEMWVDMFPMDMPAPGPAIDTAPRKPKRYELRVIIWNTDEVIL
EDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVYPFDYLMAEEKI
VISKKESMFSWDETEYKIPPRLTLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCSL
DMIRNEHELPTISIFKQKRVKGWWPFVARDENDEMELTGKVEAELHLVTGEEAEKSPVGL
GRNEPDPLEKPNRPDTTFLWFLSPLKAIRYLVCNRYKWLIIKIVLALLLLVMLGLFLYSM
PGYLVKKLLGA
NT seq
6156 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctaatggttcacctgaagacggccgatcacctccgggggaaaggtgacagg
atcgccaaagttacattcagaggtctaaccttctacagccgtgtggcagagaactgtgag
gaggtggcccagttcaatgaggtatttcggtggcccattgccagccggctggatggaaac
gagatgctggagatacaagtttacaattacagcaaagtattttccaacagactggtgggg
actttctgcatggtacttcagaaggtggctgaggagggacacctcgagctgaccgacacc
ctcatcgacgataacaacacttcgataaagaccagcgttaccatcgagatcaaataccag
tcgatggatggcacagtgggagtgtggagcgacggggagttcctggatgttcctgaggac
cgtgacgggatgtttgcctttgaaacggacagcttactgtcagggcaaagccacggctcg
gggacgtctcctggacgatccctacagggatccataccgaccttcaggaaagcagggaag
ggagttttctcagccatgaaactcggcaagatcaagagctccaaggacgatcataagaga
ggagatgagccggcggttctggacatggaggacatggacaggaaggcgatgcgtcttgct
ggagtccaggacccagacaccatctctctggcttctgtcacagccgtcaccaccaacgtc
tccaataagaggtcaaagccagatattaagatggagccgggttctggacgcccagtggat
tatcagatcagcatcacagtgatagaggcccggcagctgataggactcaacatggatccc
gtagtgtgtgtggagattggagatgacaaaaaatacacgtcgatgaaggagtccaccaac
tgcccttactacaatgagtatttcgtctttgacttccacgtccctccggacgtcatgttt
gataagatcatcaagctctcagttattcattctaaaaatctccttcgaagtgggacattg
gtgggaaccttcaagatggatgtagggactgtttactctcagcctgaacatcagttttac
cacaagtggtccatcttgtctgatcccgatgacataacagcggggtgtaaaggatatgta
aagtgtgacatcgccgtggtggggaagggcgacaacattaagaccccacacaaggccaac
gagaccgatgaagacgacttagaggggaaccttctgctcccagagggcatttcagcagag
aggcagtgggccaggttctatgtgaagatctaccgcgctgaggggcttcctaaaatgaac
accagcatcatggcgaacgtgaagaaggccttcataggagagaacagagacttggtggac
ccctacgttcaagtgcagtttgctggacagaaagggaagacgtcagtccagaggagcagt
tatgaacccatctggaacgagcaggtcgtcttcaccgagcttttccctccactctgcaaa
cgcttgaaggtccagatccgagactcggataaggtcaacgacgtcgccataggaacacac
tttgttgacctacgcaaaatatcaaatgatggtgacaaagggttcttgccgactttgggt
ccagcttgggtcaacatgtacggttccacccgtcagtacactctgatggacgagcaccag
gacctgaatgagggtcttggagaaggcgtgtccttcagagcccgtctcctgctctctatt
gctgtggagatccttgacaccacctcaccagagctcatgagctccaccgaggtgcagatg
gagggtgtctccaacatctcagagagcgccactgggaaaatagatgagttcttcctcttt
ggttccttccttgaggccaccatgatagacaggaagattggtgacaaagcaattagtttt
gaaatcacaatagggaactatggcaaccagatagatggtgtaagcaagccttcgtcgtca
aagaagaagaagaaagatggtgagaatgaagaagaggagaacgagctcattcagaactct
agtgaggacgaggcggacgaggaccgcgaccttgtttctgtctcctccactcctccaatg
aagcccgtcatcaccgacaggaattacttccatcttccctactttgaaaagaagccgtgt
gtctacatcaagagttggtggcaggaccagagaagacgactttacaactccaacatgatg
gacaagatcgctgacaagctggaagagggtttgaatgatgttcaggagatcattaagacg
gagaaggctttcccagagcgcagactcaggggagtgctggaggagctcagcgtcggctgc
agtcgatttgtgattctggctaacaaggatgtgaaccaggcaggccgaaccaaactggat
cgagagcgactgaagtcctgcatgagagagatggacagcatgggccagcaggccaagcag
atccgaactcaggtgaagaaaaacacagtcagagacaaactcaagctggtgcagaacttc
ctgcagaagctacgtttcctcgcagacgagcctcagcacagcatcccagatgttttcatc
tggatgatgagcaacaacaagcgcattgcctacgcccggattccttccaaagacatcctc
tactccatagtggatgaggaaacgggaaaagactgcggcaaagtcaaagctgtcttcctc
aagctgccgggtaagaaagggtttggtcctgcaggctggaccgttcaggctaagctggag
ttgtatctgtggctcggcctcaacaagcaaaggaaggacttcctcaatggtctgccaaac
ggttttgaagagatcaaatctgcgaaaatggaccactgtcttcaatctgtgccccccgtc
agcctggtctacaacatgaagcaggtgttccagctgagagcgcacatgtaccaggctcgc
agtctgttcgccgctgacaatagtgggctgtcagatccctttgcccgggtcttcttctcc
acacacagccaggttactgaggtcctgagcgagactctgtgccctacttgggaccagctg
ctggtgtttgacgatgtggagctgttcggggaggccagtgagctgagagatgaccctcca
atcattgtagtggaaatctatgaccaggacactgtgggcaaggcagagttcataggtcgc
acgtttgcgaagcccaccatcaagatgtgtgaggagtactatggccccccgcggttcccg
ccacagctggagtactaccagatctacagagggaactgtgttgctggagaattgctggct
gcatttgagcttctgcagatacctttcgatgtggaggcgattaggcgagctcttatcgct
gtccataactttgctgttcctcaaataaagattggtcaaggagggagaaccgatcttcct
ccacttgaagggccgacagactcggagcgtggacccattctgcctgtgccgttgggcatc
cgaccaatcctcagtcgctaccgcatcgaggttttgttctggggcttaagggacctgaag
aggattaacctggctcaggtggatcgtcctcgtgtggacatagagtgtgcaggtagaggt
gtgcagtccgtcctcatccagaactacaagaaaaaccccaacttcagcatcctggtcaaa
tggtttgaagtggaccttccagagaatgagcttctccaccctccactcaacatccgggtg
gtggactgtcgggcatttggccgctacatcctggtggggtcccatgctgtaagcagcctg
agacgtttcatctacagcaccccagacaagacctccaacaactgggccactgcagctaag
ctaatgaatggctacatggtccttgccaatggcggctccgagcctcgctcctcacccagc
ctttcctcccgcaccttctctcgccctgcaggtgacatcctcgtcaacatggacggagag
cctccgctccggaagatggacacagtggtcaagttagacgctacgtctgatgctgttgta
aaagttgacatgaccgaggaggagagtgacaaagacaaaaagaagaaaaagaagaaaaag
aagggagtagaggaagaagatgagacagatgagagagtgctggactggtggtccaaatat
tttgcttcaatagagaccctaaaggagactctcagagctcaggaggccgctcaggcagag
gcggaggagagagaggacctggagatagctgcggaggcagcagaaatcaaacctgatgac
cttcttctgaaagggtccaagacaaaagaaaagggcaaagagaagaggagctccaaggac
aagaagaaggctcaggctgcagacggctccgataaacgaccggttaaagcaaaagttgac
gagctgatggtgtacaacaaggagctggagagtgagtacggaaactttgaagactggctt
cacactttcaacttgtacagaggaaaggctggggatgacgacgaacgcgctctggatgac
gacaggattgttggcagattcaagggatccttgtgtatgtacaagctacctgtgtctgag
gaaatcacacgagatgcaggattcgatcctaatatgggcatgttccagagcatcccacat
aacgatccaatcaacgttcttgtccgtgtttacgtggtcagggctacagatcttcatcct
gctgacatcaacgggaaggctgatccgtatgttgttatcaaactgggcaagtcagaggtc
aaggacaaagagaactacatctccaagcagctcaatcctgtatttggcaaatctttcgac
atcgaggccacgttccccatggagtccatgctaacggtgtcggtgtacgactgggacctg
gttggcactgacgacttgatcggagagacaaagattgacctggagaatcgtttctacagc
aaatacagagccacctgtggcatctcatcccactattctgtccatggatacaatgtttgg
cgggacccattgaagcccagtcagattctggcgaagctctgcaaggacggcaagatcgat
ggacctcattatgggccgggaggcaaagtcaaggtggccaatcgaatatttctgggaccg
acagagatggaggatgaaaatggtctgaagaagcagactgaggagcatttggctctgacg
gtgctaaaccactgggaggagatcccgagggtgggatgcaagctggtccctgaacatgtg
gagaccagacccctgctgaaccccgacaaacccggcatcgaacagggccgtattgagatg
tgggtggatatgtttcccatggacatgcctgctcctggacctgcgattgacacagcacca
cggaaaccaaagagatatgagctcagggtgattatttggaatacagacgaagtaatactg
gaggacgatgattacttcactggggaaaagtccagtgacatttttgtcaggggatggctg
aaagggcagcaggaggacaagcaggacacagatgtgcactatcactccctgacgggtgag
ggcaacttcaactggcgcttcgtctaccccttcgattacctcatggctgaggagaagatc
gtgatctctaagaaggagtcaatgttctcctgggatgagactgaatacaagatccctcct
cgtctcacgctgcaggtctgggacgccgaccacttctctgctgatgacttcctgggtgcg
attgagttggacttaaaccggttccctcgtggcgccaagacggccaagcagtgttccctt
gacatgatccgaaacgagcacgagctgcccaccatttccatcttcaagcaaaagagggtc
aagggctggtggccatttgtagcccgcgacgagaacgatgagatggagctaacgggtaag
gtagaagctgagcttcatctggtgacaggagaggaggcggagaaaagtcctgtagggctg
ggacgaaatgagcctgatccactggagaaaccaaatcgcccagacacgaccttcctgtgg
ttcctaagcccgctgaaagccatccgctacctggtgtgcaaccgctacaagtggctgatc
atcaagattgtgctggccctgctgctgctcgtcatgctgggcctcttcctctacagcatg
ccgggctaccttgtcaagaagctgctgggggcctga
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