Clinocottus analis (woolly sculpin): 137785725 Help Entry 137785725         CDS       T10471                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism cana  Clinocottus analis (woolly sculpin) Pathway cana04010   MAPK signaling pathway cana04120   Ubiquitin mediated proteolysis cana04140   Autophagy - animal cana04144   Endocytosis cana04517   IgSF CAM signaling cana04620   Toll-like receptor signaling pathway cana04621   NOD-like receptor signaling pathway cana04622   RIG-I-like receptor signaling pathway cana05132   Salmonella infection cana05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:cana00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     137785725 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     137785725 (traf6)   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     137785725 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     137785725 (traf6)    04140 Autophagy - animal     137785725 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     137785725 (traf6)    04621 NOD-like receptor signaling pathway     137785725 (traf6)    04622 RIG-I-like receptor signaling pathway     137785725 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     137785725 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     137785725 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cana04131]     137785725 (traf6)    04121 Ubiquitin system [BR:cana04121]     137785725 (traf6) Enzymes [BR:cana01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      137785725 (traf6) Membrane trafficking [BR:cana04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     137785725 (traf6) Ubiquitin system [BR:cana04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     137785725 (traf6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 TRAF6_Z2 zf-C3HC4_4 zf-RING_5 TRAF3_RING RING_XB3-XBAT31 zf-TRAF_2 DM zf-RING_11 U-box DUF7607 Rv0250c zf-RING_6 CEP104_ZnF Motif Other DBs NCBI-GeneID:  137785725 NCBI-ProteinID:  XP_068433284 LinkDB All DBs Position Unknown AA seq 581 aa AA seqDB search MASFESNKGSLQEDSYEGAVGGELSGCALAMQEKERESLLSPSESPGAFSSSSISATSLQ AAAPLQGYDVEFDPPLESKYECPICLMALRNAIQTPCGHRFCKNCIEKSIRDTGQRCPVD NVRLLEDQLFPDNFAKREILSLTVRCPNSGCDEKMELRQLETHLARCQFATVPCSQCQQS VRKSHLDEHKTLECQRRPMSCPYCVAHFYYEDRELHEQQCPFASVKCQYCEMDLIRDQIK SHCDTECPKAPIACNFSTFGCKKSMQRHDLAQHMQEFTQMHMRFMADFLRGFTLNGTTPN SLRTLVPSVSFEDPGAAASVAACSGPRGCASSSSGGGGGGGNSCASSQPTEEIQRLREMD GRLVKQDHQLRELIILKETQAGQLAELRRRVSTLEETVKDLESQQWQGIFVWRLRGFSAH LRNQEAGLAVVEHSPGFYTGRPGYKLCLRLHLQTPNAPRCSNFISLFVHTMQGAFDGQLS WPFQGTIRLAILDQGPEAQHHVEAMETKPDLQAFQKPLIQRNPKGFGYVTFLHLHQLSQR AFVKDDTLLIRCEVTPRFDAALHRDGPAVQPRGPEASVSRD NT seq 1746 nt NT seq  +upstreamnt  +downstreamnt atggcttcctttgaaagcaacaaggggagtctgcaggaggacagctatgagggagccgtc ggcggagagttgtccggctgcgcgttggcgatgcaggaaaaggaacgggaatccctcctt agcccgtcggagagccctggcgccttcagcagcagcagcatctccgccaccagccttcag gccgctgcccccctccagggctacgatgtggagtttgacccgccgctggagagcaaatac gagtgccccatctgcctcatggctttgaggaacgccattcaaacaccatgtggtcaccgc ttctgcaagaactgcatcgaaaagtctattcgtgacacgggacagaggtgtcccgtggac aacgtaagactgctggaagaccagttgtttccggacaactttgctaaacgggagattctg tcgctgaccgttcgctgtccgaactccggctgtgatgagaaaatggagctccggcaatta gagactcatttggcacgttgtcagtttgccaccgtgccttgctcccagtgccagcagtcg gtgagaaagagccacctcgatgagcacaaaactcttgagtgccaaaggagacccatgtcc tgtccgtattgcgtggcgcacttctactacgaggacagagagctccacgagcagcagtgt cccttcgccagcgtgaagtgccagtactgcgagatggatctcatcagagaccagatcaaa tctcattgtgacaccgagtgcccgaaggcgcccatcgcctgtaacttcagcaccttcggt tgtaagaaaagcatgcagcgccacgacctggctcagcacatgcaggagttcacacagatg cacatgcgcttcatggccgatttcctgcgtggcttcaccctcaacggcaccacgcccaac tccctcaggacactggtgccgtccgtttccttcgaggatccgggggccgcggcgtctgta gcggcctgtagcgggcccagaggatgcgcgagtagtagtagcggcggcggaggcggaggc ggcaacagctgtgcgtcaagtcagccgactgaggagattcaaaggctcagagagatggac gggcggttagtaaagcaggatcaccagctgcgtgagctcatcatcttgaaggaaacgcag gccggccagctggcggagctcaggcggcgggtgtccacgctggaggagaccgtgaaggac ctggagtcccagcagtggcagggcatctttgtttggcgcctgcggggtttctccgcccac ctgcggaaccaggaagcgggcctggcggtggtggagcacagccccggcttctacacgggc cgcccgggctacaagctgtgcctgcgcttgcacttgcagacccccaacgccccgcgctgc tccaacttcatctccctcttcgtccacaccatgcagggagcgtttgacgggcagctgagc tggcccttccagggcaccatccgcctcgccatcctggaccagggccccgaggcccagcac cacgtggaggcgatggagaccaaacccgacctgcaggccttccagaagcccctcatccag cgcaaccccaagggattcggctacgtcactttcctgcacctgcatcagctgagccagagg gccttcgtgaaagacgacactctgctcatccgctgtgaggtgacgccgcgcttcgacgcc gcgctgcaccgcgacggaccagcggtgcagcccagagggcccgaggcctcagtatcgagg gactaa

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