Clinocottus analis (woolly sculpin): 137785725
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Entry
137785725 CDS
T10471
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04010
MAPK signaling pathway
cana04120
Ubiquitin mediated proteolysis
cana04140
Autophagy - animal
cana04144
Endocytosis
cana04620
Toll-like receptor signaling pathway
cana04621
NOD-like receptor signaling pathway
cana04622
RIG-I-like receptor signaling pathway
cana05132
Salmonella infection
cana05168
Herpes simplex virus 1 infection
Brite
Enzymes [BR:
cana01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137785725 (traf6)
Membrane trafficking [BR:
cana04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
137785725 (traf6)
Ubiquitin system [BR:
cana04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
137785725 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137785725
NCBI-ProteinID:
XP_068433284
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MASFESNKGSLQEDSYEGAVGGELSGCALAMQEKERESLLSPSESPGAFSSSSISATSLQ
AAAPLQGYDVEFDPPLESKYECPICLMALRNAIQTPCGHRFCKNCIEKSIRDTGQRCPVD
NVRLLEDQLFPDNFAKREILSLTVRCPNSGCDEKMELRQLETHLARCQFATVPCSQCQQS
VRKSHLDEHKTLECQRRPMSCPYCVAHFYYEDRELHEQQCPFASVKCQYCEMDLIRDQIK
SHCDTECPKAPIACNFSTFGCKKSMQRHDLAQHMQEFTQMHMRFMADFLRGFTLNGTTPN
SLRTLVPSVSFEDPGAAASVAACSGPRGCASSSSGGGGGGGNSCASSQPTEEIQRLREMD
GRLVKQDHQLRELIILKETQAGQLAELRRRVSTLEETVKDLESQQWQGIFVWRLRGFSAH
LRNQEAGLAVVEHSPGFYTGRPGYKLCLRLHLQTPNAPRCSNFISLFVHTMQGAFDGQLS
WPFQGTIRLAILDQGPEAQHHVEAMETKPDLQAFQKPLIQRNPKGFGYVTFLHLHQLSQR
AFVKDDTLLIRCEVTPRFDAALHRDGPAVQPRGPEASVSRD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctttgaaagcaacaaggggagtctgcaggaggacagctatgagggagccgtc
ggcggagagttgtccggctgcgcgttggcgatgcaggaaaaggaacgggaatccctcctt
agcccgtcggagagccctggcgccttcagcagcagcagcatctccgccaccagccttcag
gccgctgcccccctccagggctacgatgtggagtttgacccgccgctggagagcaaatac
gagtgccccatctgcctcatggctttgaggaacgccattcaaacaccatgtggtcaccgc
ttctgcaagaactgcatcgaaaagtctattcgtgacacgggacagaggtgtcccgtggac
aacgtaagactgctggaagaccagttgtttccggacaactttgctaaacgggagattctg
tcgctgaccgttcgctgtccgaactccggctgtgatgagaaaatggagctccggcaatta
gagactcatttggcacgttgtcagtttgccaccgtgccttgctcccagtgccagcagtcg
gtgagaaagagccacctcgatgagcacaaaactcttgagtgccaaaggagacccatgtcc
tgtccgtattgcgtggcgcacttctactacgaggacagagagctccacgagcagcagtgt
cccttcgccagcgtgaagtgccagtactgcgagatggatctcatcagagaccagatcaaa
tctcattgtgacaccgagtgcccgaaggcgcccatcgcctgtaacttcagcaccttcggt
tgtaagaaaagcatgcagcgccacgacctggctcagcacatgcaggagttcacacagatg
cacatgcgcttcatggccgatttcctgcgtggcttcaccctcaacggcaccacgcccaac
tccctcaggacactggtgccgtccgtttccttcgaggatccgggggccgcggcgtctgta
gcggcctgtagcgggcccagaggatgcgcgagtagtagtagcggcggcggaggcggaggc
ggcaacagctgtgcgtcaagtcagccgactgaggagattcaaaggctcagagagatggac
gggcggttagtaaagcaggatcaccagctgcgtgagctcatcatcttgaaggaaacgcag
gccggccagctggcggagctcaggcggcgggtgtccacgctggaggagaccgtgaaggac
ctggagtcccagcagtggcagggcatctttgtttggcgcctgcggggtttctccgcccac
ctgcggaaccaggaagcgggcctggcggtggtggagcacagccccggcttctacacgggc
cgcccgggctacaagctgtgcctgcgcttgcacttgcagacccccaacgccccgcgctgc
tccaacttcatctccctcttcgtccacaccatgcagggagcgtttgacgggcagctgagc
tggcccttccagggcaccatccgcctcgccatcctggaccagggccccgaggcccagcac
cacgtggaggcgatggagaccaaacccgacctgcaggccttccagaagcccctcatccag
cgcaaccccaagggattcggctacgtcactttcctgcacctgcatcagctgagccagagg
gccttcgtgaaagacgacactctgctcatccgctgtgaggtgacgccgcgcttcgacgcc
gcgctgcaccgcgacggaccagcggtgcagcccagagggcccgaggcctcagtatcgagg
gactaa
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