KEGG   Clinocottus analis (woolly sculpin): 137786626
Entry
137786626         CDS       T10471                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1 isoform X1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana03420  Nucleotide excision repair
cana04110  Cell cycle
cana04114  Oocyte meiosis
cana04120  Ubiquitin mediated proteolysis
cana04141  Protein processing in endoplasmic reticulum
cana04310  Wnt signaling pathway
cana04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cana00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    137786626 (rbx1)
   04120 Ubiquitin mediated proteolysis
    137786626 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    137786626 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    137786626 (rbx1)
   04350 TGF-beta signaling pathway
    137786626 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    137786626 (rbx1)
   04114 Oocyte meiosis
    137786626 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cana04121]
    137786626 (rbx1)
   03400 DNA repair and recombination proteins [BR:cana03400]
    137786626 (rbx1)
Enzymes [BR:cana01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     137786626 (rbx1)
Ubiquitin system [BR:cana04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   137786626 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     137786626 (rbx1)
   Cul2 complex
     137786626 (rbx1)
   Cul3 complex
     137786626 (rbx1)
   Cul4 complex
     137786626 (rbx1)
   Cul7 complex
     137786626 (rbx1)
   Cul8 complex
     137786626 (rbx1)
   Cul9 complex
     137786626 (rbx1)
DNA repair and recombination proteins [BR:cana03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      137786626 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      137786626 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 137786626
NCBI-ProteinID: XP_068434723
LinkDB
Position
Unknown
AA seq 111 aa
MLQQSNSLVYFWSVNKTTSSNVCDLTSHQWNAVALWAWDIVVDNCAICRNHIMDLCIECQ
ANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 336 nt   +upstreamnt  +downstreamnt
atgttgcaacagtcaaattcattagtttatttttggagtgtcaacaagaccacctccagt
aatgtttgtgatttgacgtctcaccagtggaatgccgtggcgctatgggcctgggacatc
gtggtggataactgcgccatctgtcgtaaccacatcatggacctgtgtatagagtgccag
gccaaccaggcctctgcaacctctgaggagtgcactgttgcctggggtgtttgcaatcat
gccttccacttccactgtatttcccgctggctgaaaaccagacaggtgtgtcctttggac
aacagggagtgggagtttcagaaatatggacactag

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