Clinocottus analis (woolly sculpin): 137787632
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Entry
137787632 CDS
T10471
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04115
p53 signaling pathway
cana04145
Phagosome
cana04148
Efferocytosis
cana04350
TGF-beta signaling pathway
cana04510
Focal adhesion
cana04512
ECM-receptor interaction
cana04820
Cytoskeleton in muscle cells
Brite
Membrane trafficking [BR:
cana04131
]
Endocytosis
Phagocytosis
Opsonins
137787632
Glycosaminoglycan binding proteins [BR:
cana00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137787632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137787632
NCBI-ProteinID:
XP_068436366
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Position
Unknown
AA seq
1170 aa
AA seq
DB search
MMLCGIFLLFMLWSCDGARLAAESRDDNSVFDLFDLVRVNKRQNGVSLVKGADPYSPAYK
VLNADLIPPLPDTYLRDLLDSIQAERGFLLLVNLKQFKKTRGSLLTIEKNDGSGPVFEII
SNGKANTLDVVYSTTDQQQVVSIEDADLATGHWKNITLFVQDDRVQLFVGCEEINVSEMD
LPISKVLSQEVADVARLRIAKGAVRDKFMGVLQNVRFVFRTTLDAILRNKGCQSGATLTD
VLTLENPVNGSSPAIRTDYTGHQTKDMQSVCGFSCEDIGSMFKELKGLGVVVKQLSNELR
KVSEESALLKKQMNIHSGICLHNGIVHKDKDEWTVDSCTECTCQNSATVCRKISCPMISC
ANATMPDGECCPRCERHIEDGWSPWSDWTHCSVTCGRGIQQRGRSCDRINSNCEGTSVQT
RDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGDITRIRLCNSPTPQMDGRDCQGEGRQ
TEICQMSPCPINGGWGPWSPWDTCTVTCGGGVQTRKRLCSDPVPKYGGKDCVGDASVSQV
CNKLDCPIDGCLSSPCFPGAKCNSFPDGSFRCGRCPLGYSGNGIACKDVDECKHVPDACH
THNGVHRCENTEPGYNCLPCPTRFSGPQPFGRGLEQATAKKQVCEPRNPCQDGSHDCHRN
SNCIYLGVFSDSMFRCECKPGYAGNGRICGEDSDLDGWPNTNLPCVENATYHCKKDNCPN
LPNSGQEDHDKDGLGDECDPDDDNDRIPDDRDNCPRVYNPAQYDTDRDDVGDSCDNCVFE
ANTDQTDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPLEH
NPDQFDSDSDLVGDKCDNNQDIDEDGHQNNLDNCPYISNANQVDHDKDGKGDACDHDDDN
DGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNVLDIYDVCPENFDISETDFRRF
QMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFVNTDRDD
DYAGFVFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKMVNSTTGPGEHLRNAL
WHTGDTAGQVQTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNIFD
KTYAGGRLGLYVFSQEMVYFSDLKYECRDT
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgtggcatatttttgctgttcatgctttggagctgtgatggagcgagattg
gcagcagagagtcgggacgataacagcgtgtttgacttatttgatctggtccgggtaaac
aagagacaaaacggagtgagtttggtcaaaggtgcagatccctacagccctgcatacaag
gtcctcaacgcagacctgatccccccactgcccgacacctacctcagggacctcctcgac
tccatccaggccgagaggggcttcctcctcctggtcaacctgaagcagttcaagaaaacc
aggggcagccttctgaccatcgagaagaatgacggctccggacccgttttcgagatcatc
tccaacgggaaggcgaacactctggatgtggtctactccaccacggaccagcagcaggtc
gtgtccatcgaggatgctgacttggccactggacactggaagaacatcacactgttcgtt
caggacgaccgggtgcagctttttgtcggctgcgaggagatcaatgtatcagagatggat
ttgccaatctccaaagtgctgtcccaggaggtggcagacgttgcccggctcaggattgca
aagggtgccgtgagggacaaattcatgggagtgcttcaaaatgtgcgctttgtctttcgg
accacgcttgatgctatactaagaaataagggatgccagagcggagctaccttaactgat
gtcttgaccctggagaatccagtcaatggctccagcccggccattaggactgattacact
ggccaccaaaccaaagatatgcagtctgtttgcggtttctcttgtgaggacatcggcagc
atgtttaaggaactcaagggactcggcgttgtcgtgaaacagctgtcaaatgagctccgc
aaagtgtctgaggagagcgcactgctgaaaaagcaaatgaacatccacagtggaatttgc
ctccacaacggcatcgtgcacaaggacaaagatgaatggaccgtggatagctgcaccgag
tgcacctgccagaactctgctaccgtgtgtcgcaaaatctcctgccccatgatctcatgt
gctaacgccaccatgccagatggagagtgctgccctcgctgtgaaagacacatagaggat
ggatggtccccctggtctgactggacccattgttcggtgacttgtggacggggcatccag
cagcgcggccgctcctgtgaccgcatcaacagcaactgtgagggcacctctgtccagacc
cgtgactgctacccccaggaatgtgacaaacgcttcaaacaggatggcggctggagccac
tggtctccctggtcatcgtgctctgtgacctgtggtgagggcgacatcacccggatacgc
ctctgcaactcccccacaccgcagatggatggaagggactgccagggagaaggacgtcaa
acggaaatctgccaaatgtcaccctgtcctatcaatggaggttggggaccttggtcacca
tgggacacctgcactgttacctgtggtggaggagtccagacccgcaaacgtctctgctcc
gaccccgtccccaaatacggaggaaaggattgtgttggtgatgcttctgtgtctcaagtg
tgcaacaaactggactgtcctattgacggttgtctctccagcccatgcttccctggagca
aagtgcaacagcttccccgatggctccttcaggtgtggcaggtgtccacttggctactct
gggaacggcattgcctgcaaagacgtagatgaatgtaaacatgtccctgatgcttgccac
acacataacggagtccatcgctgtgagaacactgagcccggttacaactgtctgccctgc
cctacacgtttctccggccctcagccctttggaagaggactggaacaggcgactgctaaa
aaacaggtttgcgaaccccgtaacccttgccaagatggcagccacgactgccataggaat
tcaaactgcatctacttgggcgtcttctccgactccatgttccgctgcgagtgcaagcca
gggtatgctgggaacggacgcatttgcggagaggacagtgacctggacggatggcccaac
actaacctgccttgtgtggagaacgccacctaccactgcaagaaggataactgccccaac
cttcccaactctggccaggaagatcacgacaaagatggcctgggtgatgaatgtgatcct
gatgatgacaatgatagaatccccgatgatagggacaactgcccaagagtgtacaaccca
gcccagtatgacacagacagagatgatgttggcgacagctgtgacaactgtgtgttcgag
gccaacaccgaccaaacggacactgacaacaatggcgagggtgatgcctgtgctgttgac
attgatggtgacggcatcctgaacgagaacgacaactgcccatatgtttacaacgtggac
cagagagataccgacagggacggcgtgggagatcattgcgacaactgccctctggagcac
aaccccgatcagtttgactccgactcagatctcgttggagacaagtgcgacaacaaccag
gacattgacgaagacggccaccagaacaacttggacaactgcccctacatatccaacgcc
aatcaggtagaccacgacaaggatggtaaaggtgacgcctgcgaccatgacgatgacaac
gacggcattcctgatgacaaagacaactgtaggctggcgttcaaccctgatcagctggac
tctgatggcgatggccgtggtgatgtgtgcaaagacgattttgaccaagacaatgttctg
gacatctatgacgtgtgcccggagaactttgacatcagtgaaacagacttccgcagattc
caaatggttcctctggaccccaagggcacctcgcagattgaccccaactgggtggtccgg
catcagggcaaggagttggtgcagaccgtcaactgcgatcctggcattgctgttggttac
gatgagttcagcgcagtggatttcagtgggacgttcttcgtcaacacagacagagatgac
gactacgctggtttcgtatttggctaccagtccagctcacgcttctacacggtgatgtgg
aaacagatcacacagacctactggtctcacacacccacaagagctcaaggctactctggc
ctgtcaattaaaatggtcaactccaccactggacccggtgagcacttgaggaacgccctg
tggcataccggagacaccgcaggccaggttcagactctgtggcacgaccccaagaacatt
ggctggaaggacttcactgcctacagatggcatctgactcacagaccaaagactggactc
attagagtggtcatgtatgaaggcaagaggatcatggctgattctggaaacatctttgac
aagacatacgccggtgggcggctaggcttgtacgtcttctctcaggagatggtttacttc
tcagacctcaaatacgaatgcagagatacataa
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