KEGG   Clinocottus analis (woolly sculpin): 137790037
Entry
137790037         CDS       T10471                                 
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana03440  Homologous recombination
cana03460  Fanconi anemia pathway
cana04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cana00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    137790037
  09124 Replication and repair
   03440 Homologous recombination
    137790037
   03460 Fanconi anemia pathway
    137790037
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cana01009]
    137790037
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cana04121]
    137790037
   03036 Chromosome and associated proteins [BR:cana03036]
    137790037
   03400 DNA repair and recombination proteins [BR:cana03400]
    137790037
Enzymes [BR:cana01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     137790037
Protein phosphatases and associated proteins [BR:cana01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     137790037
Ubiquitin system [BR:cana04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    137790037
  Multi subunit type E3
   BRCC complex
    137790037
Chromosome and associated proteins [BR:cana03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     137790037
DNA repair and recombination proteins [BR:cana03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     137790037
    BRCA1-A complex
     137790037
    BRCA1-B complex
     137790037
    BRCA1-C complex
     137790037
    BRCA complex
     137790037
   FA (Fanconi anemia) pathway
    Downstream FA components
     137790037
SSDB
Motif
Pfam: BRCT BRCT_2 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 RTT107_BRCT_5 zf-C3HC4_3 zf-RING_2 RING_XB3-XBAT31 zf-RING_UBOX zf-Nse zf-RING_5 zf-RING_6 zf-RING_4 zf-RING_10 TRAF3_RING zf-ANAPC11 YicC-like_C PTCB-BRCT zf-MIZ Prok-RING_4 zf-rbx1
Other DBs
NCBI-GeneID: 137790037
NCBI-ProteinID: XP_068440082
LinkDB
Position
Unknown
AA seq 1435 aa
MKTPTTTDVRKGISVLWETMQCPICLDLLTEPVSTKCDHQFCKFCMMKLLDNTKNNSADC
PVCKTKITKRGLQESPGFQRLVAGLQDMIQAYEHDTGINYFTGLSKQEGQLGATDTEVTK
HCPDKSFGDTPDNMENVDNGDPSRSHSSTIAAQNEFAKLMGLEDTSPMTTEIEGLDSGLG
EAPPISDKKLHSPTDKLEPETTEVVETHKTRGKTRPLRLEKASLPPSLISGETEHQPLRK
SSRKKQKKDLVPDKILEEKQKKSRQKVAEWLMKVPTEGSLELDNLHEDTGDSDSCSSAST
IDITKHNSEVNPKREDRAKALEEQVFGAVYKRERRGTRILFPPVHAFSKTPTTKEIQMIP
KIRTRNTLNHADFVKKTSSEDNSESSMEEEQQGREEENDTSSDIVTKAKQTEVMEKTSRD
KYGKELKNMPERDIIDDNDAVSSSTSDIGQLPLRKSTRGTRNALQQVDSDLQEEAEAKSE
SAGQKKTEKKKSKNLRSEKGKPARVPKPLILVGVKNGDTSPKARPRSEEVQVHIENYPSS
EDQEIPVKRLSRRSRRLQLFAEEVQEGHKKANLKANIAEKDINVAKKSEEAKYGTLDNNT
SPQEGNMTRVAERNGCIFDQQLEEIENMESGEGTSYLRPTEDVKESIAVVPNVEPLSEDN
GACYGPVVPSSTSPAIAVVALTLKSDDQNNTLLETCARQTKCAGTEEAEDKNDSELDTEQ
LLKSFKATKRKSFLLGGPNVKRSCGLEQENLQAAEAEAKQQVSSGVESTKNLIYTKVPEI
TKQEALRDNENSSWSDVISPSNSPAQARKPVIEKPDQVVVESSIPDASCSGQDSAGGNCV
SRNSISSALTPNKVSKRDIESPHLSVVPQVFDSGLFLRAVEHEELNEASKCSQVSENQLD
CTVRDAGQGKSILVPNSAASGTHYVNSTQDFLHAESLTPDGLGLPVVDIVHEATSLSNGS
GEQSFHSSVKSVARKRTRARRLESSFESDCSEEGLPTLTELFGASAPPPAVTKDQGGSGE
AHGCESATAGAAQQLSRPPACLSPDCVNSSQASVDLFGTPEKSNVPVNDITVSSQFETSQ
FSSEVLVTQQKIEMQKELVRLEKLMALVSEVLQEKEDSPAKEVPSETNQSRQTDADSLRL
LPCDQDTGQSSDREAAPEVEREPSTRPSKQSSRAEMAVQSSAHTEPGLKGIGDSKTPCSS
SAAKTLRTIASPLDGQEDKENNTPPRDRSKTKIVLVSSGLDPNEQLLVKRFAKRVGARVV
SKVTPEVTHIIMHTDDQLVCERTLKYFLGIAGRKWVVSFQWISECFRQKELLDESVFEVR
GDVVNGPNHQGPMRARTSEDNNLLMKGYTICFQGPFTDMTTDEMEWMVELCGAAVVKDPL
LLDSKQISHQLVIVSGSESSSTYSSLSAHATVVTRGWLLDTVATYSLQNYNKYTT
NT seq 4308 nt   +upstreamnt  +downstreamnt
atgaaaacaccgacaaccaccgatgtcagaaagggtatttcagtcctttgggagaccatg
cagtgtcccatatgcttggatttattgactgaacctgtttctactaagtgtgaccatcag
ttttgcaaattttgtatgatgaaacttttggacaacaccaaaaacaacagtgctgactgt
ccagtgtgtaaaaccaaaataaccaaaaggggcttgcaggagagtcctgggtttcagcga
ctggttgcaggcttgcaggacatgattcaggcatatgaacatgacactggcatcaactac
ttcactggactgtccaagcaggaaggacaactgggagcaacagatactgaagttactaaa
cattgtcccgataagtcattcggagatacacctgacaacatggaaaatgttgacaatggg
gatccttcaaggtctcactcctcgacgattgcagcccagaatgagtttgcaaaactgatg
ggacttgaagacacaagtcctatgacgacagaaattgaaggcctggacagtggacttggt
gaggccccaccaatttctgacaagaaattgcacagccctacagataaattggaaccagaa
acgacagaagttgtggaaacacacaagactcgaggcaaaacaagacccctcagattggag
aaagcatcccttccgccatcattaatttcaggtgagactgaacaccaacctttaagaaag
tcctcaaggaagaagcagaaaaaggatttggtgcccgacaagattctggaggaaaaacag
aagaagagtcgacagaaagttgccgagtggctcatgaaggttccaactgaagggagtctt
gaattagataatctacacgaagacacaggcgattctgacagctgttcctctgcttcaaca
atagatataactaaacacaacagtgaagtgaatccgaagagagaggatcgtgctaaagcc
cttgaagagcaggtgtttggggccgtctacaaacgagagagaagggggaccaggatcctc
tttcctccagttcatgcttttagcaaaacaccaacaaccaaagaaatacaaatgatcccc
aaaataaggacgaggaacactctcaatcatgcagattttgtcaagaaaacaagctctgaa
gacaacagtgaaagcagtatggaagaagagcaacaagggagagaagaagaaaatgacacc
agcagtgacattgtcacaaaagcaaaacagacagaagttatggagaaaacttctagagac
aaatacgggaaagagttgaagaacatgccagaaagggacataattgatgacaacgatgct
gtttccagttctacgtctgatattggacagctgccactcagaaagtccactagagggacg
cgtaacgctctgcagcaggtcgacagtgatttgcaagaggaagctgaggcaaagtcggag
agtgctgggcaaaaaaaaactgagaagaagaaaagtaaaaacttgaggtcagaaaaaggc
aagcctgctagagtgccaaaacccctcattctggtcggagttaaaaatggagataccagt
cctaaagctagaccgaggtcggaagaagttcaagttcacattgagaattacccgagcagc
gaagaccaagaaatccccgtcaagagactctcaaggagaagtagaagacttcagctcttt
gctgaggaagtgcaagagggtcacaagaaagcaaacttgaaagccaatatagctgaaaaa
gacatcaatgttgcaaagaaatctgaggaagctaaatatggaacattggacaataacaca
tcacctcaggagggaaacatgactcgggtggctgaaagaaacggatgtatttttgatcaa
cagttagaagaaatagaaaacatggaatctggtgagggaacatcttatttgaggccaaca
gaagacgttaaagagtccattgctgtagtgccaaatgttgaaccgttgtctgaagataat
ggcgcgtgttatggccccgtggtcccaagctccacaagtccagctatagcggtggtagct
ctaacgcttaaaagcgatgaccaaaacaatactctgttggaaacgtgcgctcgccagact
aaatgtgccggaacagaagaagcggaggataagaatgacagcgagctggacacagagcaa
ctgctcaagagcttcaaagccaccaaaagaaaatctttccttcttggcggtccaaatgtg
aagagaagctgtggtttggagcaagaaaacctgcaggctgcagaagcggaggcaaaacag
caagtttcttctggtgttgaatctacaaaaaatctgatttacacaaaggtacctgaaatt
accaagcaagaggcattaagagacaatgaaaactcatcttggagtgatgttatctcccct
tctaactcacctgcccaagcaagaaagccagttattgagaaaccagatcaagtggtggta
gaatcctcgatccctgatgctagttgttcaggtcaagatagcgctggtggtaactgtgtc
tccaggaatagtattagtagtgcccttactcctaataaagtgtcaaagcgggatattgaa
agtcctcatctttctgttgtgcctcaagtgttcgattctggcctcttcctcagagccgtt
gaacacgaggagctaaatgaagcctcaaagtgttctcaagtgtcagagaaccagctggat
tgcactgtgagggatgctggccaagggaagagcattttggtgcccaattcagctgctagt
ggcacacattacgtcaacagcactcaagattttttacatgcagagtctttaactcccgat
ggccttggacttccagttgtagacattgtccacgaagcaacgtcgctcagcaatggtagc
ggagagcagagcttccattcctccgtcaagagcgtggccaggaagaggaccagggcaagg
aggctcgagtcgtcatttgagtcggactgcagtgaagagggattacccactttgacagaa
ctcttcggcgcatcagctcctcctcccgctgtgacaaaggatcagggaggctccggtgaa
gctcatggatgtgagagcgctacagctggtgcagcgcaacagttgagccgcccacctgcg
tgcctgagccccgactgtgttaactccagccaggcgtctgtagacttgtttggcacacca
gagaaaagtaatgtcccagtgaacgacatcactgtttcctcacaattcgaaacctcccaa
ttttcaagcgaagtcctcgtcacacagcaaaagatagaaatgcagaaggagctggtgagg
ttggagaagttgatggctctggtgtcagaggtgcttcaggagaaagaagacagtcctgca
aaagaagtcccctcagaaacaaatcagagcagacaaacagacgcagactccttgagactc
ctcccgtgtgaccaggacacaggtcaaagctcagaccgagaagcggctccagaagtagag
cgagagcccagcacaagaccgtcaaagcaaagcagcagagcagagatggcggtgcagagc
tccgcacacacagagccgggcctaaaaggcatcggcgactccaagacgccctgttcgagt
tcagctgccaaaacattaagaaccattgcttcaccattagatgggcaagaagacaaagaa
aataacactcctccgagagataggagtaaaactaagattgtgctggtgtcgtctggatta
gaccctaatgagcagctcctggtcaaaaggtttgccaagcgcgttggtgcccgtgtggtt
tctaaggtaaccccggaggtgacccacatcatcatgcacacagatgaccaactggtatgt
gagcgcacactcaagtacttccttggcatcgcaggcaggaagtgggtggtgagcttccag
tggatttcagagtgcttcagacaaaaggaactcctcgatgagagtgtctttgaagtgaga
ggtgacgtggtgaatggacccaaccaccaaggccccatgagagctcgtaccagtgaagat
aataacttgctcatgaaaggctacacgatttgctttcaaggcccttttacagacatgacg
acagatgaaatggagtggatggtggagctctgtggagcggctgtagtcaaagatccactt
cttctcgacagtaaacagatctctcatcagctggtcattgtgtctggatcagagtcgtcg
tccacgtacagcagtctctctgcacatgccacagtcgtgactcgtggttggctgttggac
acagtggcgacctacagcctccaaaactacaacaagtacacaacatga

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