KEGG   Clinocottus analis (woolly sculpin): 137802950
Entry
137802950         CDS       T10471                                 
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
  KO
K03174  TNF receptor-associated factor 3
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana04620  Toll-like receptor signaling pathway
cana04621  NOD-like receptor signaling pathway
cana04622  RIG-I-like receptor signaling pathway
cana05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cana00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    137802950 (traf3)
   04621 NOD-like receptor signaling pathway
    137802950 (traf3)
   04622 RIG-I-like receptor signaling pathway
    137802950 (traf3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    137802950 (traf3)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF3_RING CCDC39 zf-C3HC4 NOCA1_mid ATG16 zf-C3HC4_2 Sina_ZnF CCDC113_CCDC96_CC zf-C3HC4_4 zf-TRAF_2 AAA_13 FKBP15 RING_XB3-XBAT31 MctB Baculo_PEP_C Fzo_mitofusin Fez1 Snapin_Pallidin DUF8567 DUF724 GAS FapA
Other DBs
NCBI-GeneID: 137802950
NCBI-ProteinID: XP_068457271
LinkDB
Position
Unknown
AA seq 595 aa
MSAGRSADGREVQIPLQQVAPSLTTPLSVALPIIPPSHRQVNPWPPNDTSTSQGVPAGFL
PLHGGFRDHFVLTPEAKYCCETCSLVLCQPRQTECGHRFCQSCINDILSHPNPVCPADME
PLFKDKIFRDVCCHREIMALKVYCRSEANGCQEQISLQQIPDHLNVCPFFEVPCPLGKCK
ERMMRKEIPDHLSWKCKHRESSCEFCMTKMPLTDLQKHKETVCPAFPVSCPNHCSFSSLP
RSELSSHQHDCPKAQVSCQFHRYGCTFKGLNLDMRQHESTLAAEHLRMMANRNSTLENKV
EDIKGELLERYKVLPALNSRLSELENQSDELREKNRQMEQKLATMQKLMSSHSEKLLEVE
LELRSLRVLRDEVENLRGTLENVRTRLNTLEQGGRSGTGSTTHTLASLENQLKRHDEMLS
VHEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVGAKTLSLYSQPFYTGYFGYK
MCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFK
PDPNSSSFRRPAAEMNIASGCPLFVSQSVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgtcagcggggaggagtgctgacgggagggaggtgcagattcccctccagcaggtggcg
ccctccctgaccacacccctctcagtggctctgcccatcatcccgccctctcaccgtcaa
gtcaatccctggcctcccaacgacacctctacttcacaaggtgtccctgcaggtttcttg
cctcttcacggaggattcagagatcactttgtcttaactccagaagccaaatactgctgc
gagacctgcagcctggtcttgtgccagccccgccagaccgagtgtggacaccgcttctgt
cagagctgcatcaacgatatcctcagtcatccaaacccggtatgtccagctgacatggag
cctctgttcaaagacaagatctttcgagacgtttgctgccatcgtgagattatggcactg
aaggtttactgtcgcagtgaagctaacggttgtcaggagcagataagtctgcagcagata
cctgaccacctgaatgtgtgtccgttcttcgaggttccttgtccgttggggaaatgtaaa
gagcgaatgatgaggaaagagattcccgaccacctgagctggaaatgtaaacacagagag
agcagttgcgagttctgcatgaccaagatgcctctgactgacctacagaagcacaaagag
acggtgtgtccagcgttcccagtgtcgtgtccaaaccactgctccttttcctcccttccc
cggagcgagctgtcgagtcaccagcacgattgtcccaaagctcaggtgagctgtcagttc
caccgctacggctgcaccttcaagggtttgaacctggacatgaggcaacatgagtccacc
ttagcagcggaacacctgagaatgatggccaacagaaactccacattagagaacaaggtg
gaggacattaaaggtgagctgttggagaggtataaggtgcttcctgctctcaacagtcga
ctgtcagaactagaaaaccagagcgacgagctgagagagaagaaccgacagatggagcag
aaactggccaccatgcagaaactaatgagctctcactcagagaagcttctggaggtggag
ctggagcttcgttcccttcgtgtgctcagagatgaggttgagaacctgaggggaaccctg
gagaacgtccggacgagactgaatactctagaacaagggggacgcagcgggactggatcc
acaacacacactctggcatctctggagaatcagctgaagcgacatgatgagatgctgagt
gtccatgagatccgattagccgacatggacctgcgtttccaggtgctggagacggcgagt
tacaatgggaccctgatctggaagatccgcgactacaagagaaggaaacaggaagcggtg
ggggcgaagacattgtcgctttattcgcagccattttacaccgggtactttgggtacaag
atgtgcgcccgtgtctacctgaacggagacggcatgggcaaggggacacacctgtctctg
ttcttcgtggtcatgagaggcgagtacgatgccctgctgccctggcctttcaaacagaag
gtgactctgatgctgatggaccagggtccgtcgaggaaacacttgggggatgcctttaag
cctgatccaaatagcagcagcttcagacgtcctgcagcagagatgaacattgcttctggt
tgtcctctgtttgtttctcagagcgtcctggagacgggcagttacatcaaagacgacacc
atcttcatcaaggtgacagtagatacctctgaccttcctgacccgtga

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