Clinocottus analis (woolly sculpin): 137802950
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Entry
137802950 CDS
T10471
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04620
Toll-like receptor signaling pathway
cana04621
NOD-like receptor signaling pathway
cana04622
RIG-I-like receptor signaling pathway
cana05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
137802950 (traf3)
04621 NOD-like receptor signaling pathway
137802950 (traf3)
04622 RIG-I-like receptor signaling pathway
137802950 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137802950 (traf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
CCDC39
zf-C3HC4
NOCA1_mid
ATG16
zf-C3HC4_2
Sina_ZnF
CCDC113_CCDC96_CC
zf-C3HC4_4
zf-TRAF_2
AAA_13
FKBP15
RING_XB3-XBAT31
MctB
Baculo_PEP_C
Fzo_mitofusin
Fez1
Snapin_Pallidin
DUF8567
DUF724
GAS
FapA
Motif
Other DBs
NCBI-GeneID:
137802950
NCBI-ProteinID:
XP_068457271
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MSAGRSADGREVQIPLQQVAPSLTTPLSVALPIIPPSHRQVNPWPPNDTSTSQGVPAGFL
PLHGGFRDHFVLTPEAKYCCETCSLVLCQPRQTECGHRFCQSCINDILSHPNPVCPADME
PLFKDKIFRDVCCHREIMALKVYCRSEANGCQEQISLQQIPDHLNVCPFFEVPCPLGKCK
ERMMRKEIPDHLSWKCKHRESSCEFCMTKMPLTDLQKHKETVCPAFPVSCPNHCSFSSLP
RSELSSHQHDCPKAQVSCQFHRYGCTFKGLNLDMRQHESTLAAEHLRMMANRNSTLENKV
EDIKGELLERYKVLPALNSRLSELENQSDELREKNRQMEQKLATMQKLMSSHSEKLLEVE
LELRSLRVLRDEVENLRGTLENVRTRLNTLEQGGRSGTGSTTHTLASLENQLKRHDEMLS
VHEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVGAKTLSLYSQPFYTGYFGYK
MCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFK
PDPNSSSFRRPAAEMNIASGCPLFVSQSVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggggaggagtgctgacgggagggaggtgcagattcccctccagcaggtggcg
ccctccctgaccacacccctctcagtggctctgcccatcatcccgccctctcaccgtcaa
gtcaatccctggcctcccaacgacacctctacttcacaaggtgtccctgcaggtttcttg
cctcttcacggaggattcagagatcactttgtcttaactccagaagccaaatactgctgc
gagacctgcagcctggtcttgtgccagccccgccagaccgagtgtggacaccgcttctgt
cagagctgcatcaacgatatcctcagtcatccaaacccggtatgtccagctgacatggag
cctctgttcaaagacaagatctttcgagacgtttgctgccatcgtgagattatggcactg
aaggtttactgtcgcagtgaagctaacggttgtcaggagcagataagtctgcagcagata
cctgaccacctgaatgtgtgtccgttcttcgaggttccttgtccgttggggaaatgtaaa
gagcgaatgatgaggaaagagattcccgaccacctgagctggaaatgtaaacacagagag
agcagttgcgagttctgcatgaccaagatgcctctgactgacctacagaagcacaaagag
acggtgtgtccagcgttcccagtgtcgtgtccaaaccactgctccttttcctcccttccc
cggagcgagctgtcgagtcaccagcacgattgtcccaaagctcaggtgagctgtcagttc
caccgctacggctgcaccttcaagggtttgaacctggacatgaggcaacatgagtccacc
ttagcagcggaacacctgagaatgatggccaacagaaactccacattagagaacaaggtg
gaggacattaaaggtgagctgttggagaggtataaggtgcttcctgctctcaacagtcga
ctgtcagaactagaaaaccagagcgacgagctgagagagaagaaccgacagatggagcag
aaactggccaccatgcagaaactaatgagctctcactcagagaagcttctggaggtggag
ctggagcttcgttcccttcgtgtgctcagagatgaggttgagaacctgaggggaaccctg
gagaacgtccggacgagactgaatactctagaacaagggggacgcagcgggactggatcc
acaacacacactctggcatctctggagaatcagctgaagcgacatgatgagatgctgagt
gtccatgagatccgattagccgacatggacctgcgtttccaggtgctggagacggcgagt
tacaatgggaccctgatctggaagatccgcgactacaagagaaggaaacaggaagcggtg
ggggcgaagacattgtcgctttattcgcagccattttacaccgggtactttgggtacaag
atgtgcgcccgtgtctacctgaacggagacggcatgggcaaggggacacacctgtctctg
ttcttcgtggtcatgagaggcgagtacgatgccctgctgccctggcctttcaaacagaag
gtgactctgatgctgatggaccagggtccgtcgaggaaacacttgggggatgcctttaag
cctgatccaaatagcagcagcttcagacgtcctgcagcagagatgaacattgcttctggt
tgtcctctgtttgtttctcagagcgtcctggagacgggcagttacatcaaagacgacacc
atcttcatcaaggtgacagtagatacctctgaccttcctgacccgtga
DBGET
integrated database retrieval system