Clinocottus analis (woolly sculpin): 137805354
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Entry
137805354 CDS
T10471
Symbol
traf2a
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04010
MAPK signaling pathway
cana04137
Mitophagy - animal
cana04141
Protein processing in endoplasmic reticulum
cana04210
Apoptosis
cana04217
Necroptosis
cana04621
NOD-like receptor signaling pathway
cana04622
RIG-I-like receptor signaling pathway
cana04920
Adipocytokine signaling pathway
cana05132
Salmonella infection
cana05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137805354 (traf2a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
137805354 (traf2a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
137805354 (traf2a)
09143 Cell growth and death
04210 Apoptosis
137805354 (traf2a)
04217 Necroptosis
137805354 (traf2a)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
137805354 (traf2a)
04622 RIG-I-like receptor signaling pathway
137805354 (traf2a)
09152 Endocrine system
04920 Adipocytokine signaling pathway
137805354 (traf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137805354 (traf2a)
09171 Infectious disease: bacterial
05132 Salmonella infection
137805354 (traf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137805354 (traf2a)
04121 Ubiquitin system [BR:
cana04121
]
137805354 (traf2a)
Enzymes [BR:
cana01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137805354 (traf2a)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
137805354 (traf2a)
Ubiquitin system [BR:
cana04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
137805354 (traf2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-RING_4
zf-RING_5
zf-C3HC4_4
Sina_ZnF
MATH
EFL1
zf_C2HC_14
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
137805354
NCBI-ProteinID:
XP_068461329
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MAAQEQSPPSSLEGNKPGFPKKILANSLEDKHLCNSCQKVLRRPLQAQCGHRFCSFCFNK
IVSAGPQKCSACIKEDLFEEPTSILKQGGAFPDNAARREVEALAAVCPNEGCTWTGTIKE
FEASHEGHCDFMIILCPSCKELMRANEQERHNERECPERTLNCKYCKEPFLLKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKCKAPCRFHIVGCDTSVEKEKLHDHERQCS
YEHLNLLLHFIMGIKVSLESLQPQSLEVASHKLHELHQSLRDLELKMSQMGGASAAAPAL
GACAPTLAASFTPLPSAVGAALELQLHSEKGKVAELSRRCQELELKVGTFENIVCVLNRE
MERSCTTMEAYNRQHRLDQDKIEILNNKVRQLERTVSLRDLSIVEMEGKMREMSAATYDG
IFVWKISDFTKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFV
VMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDVSSSSFQRPVSDMNIASGCPLF
CPLSKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaggagcagtctccaccatcttccctggaaggcaacaaacccggcttccca
aagaaaattttggccaacagcctcgaggacaagcatttgtgcaactcgtgccagaaagtg
ttgagaaggcctttgcaagcccaatgcggtcaccgcttttgttcgttctgtttcaacaaa
attgtgagtgctgggccacagaagtgcagcgcttgcatcaaagaagacttgtttgaggaa
cctacctccattctcaagcaaggcggtgctttccccgacaatgcggctcggagagaagtg
gaggccttggcggccgtctgtcccaacgaaggatgcacgtggacggggaccatcaaagaa
tttgaggccagccacgagggccactgtgacttcatgatcatcctgtgtccgtcctgcaaa
gagctgatgagggccaacgaacaggagcgccacaacgagagggaatgtccagagaggacg
ctcaactgcaaatactgcaaggaacccttcctgttaaagaacatcaaggcccatgatgaa
atctgtccaaagtacccgatgatttgcgaaggctgtgcgaagaaaaagatccccagagaa
aagtatgtggaccatattaagttctgcagtaaatgtaaagcaccatgcagatttcatatt
gttggctgcgatacatctgtggagaaagagaagctccatgaccacgagcgccagtgttcg
tacgagcacctcaacctgctcctgcacttcatcatgggcatcaaggtgagcctggagagc
ctgcagccccagagcctggaggtggccagccacaagctgcacgagctccaccagtcgctc
agggacctggagctaaagatgagccagatgggcggggcctccgccgccgctcccgcactg
ggcgcgtgcgccccgaccctggccgcctccttcacgccgctgcccagcgcagtgggcgcc
gccctggagttgcagctccacagcgagaagggcaaggtggccgagctgagccggcgctgc
caggagctggagctcaaagtgggcacgttcgagaacatcgtgtgcgtcctcaaccgggag
atggagcgctcctgcaccaccatggaggcctacaaccgccagcaccggctggaccaggac
aagatcgagatcctcaacaacaaggttcgtcagctggagaggacggtgagtctgcgggac
ctgtccatcgtggagatggaggggaagatgagggagatgtcggcggccacgtacgacggc
atcttcgtctggaagatctcggatttcaccaagaagaggcaggacgccgtggcgggccgc
gcccccgccatgttctctcctgccttttacaccagcaaatacggctacaagatgtgcctg
cggatctacctgaacggggacgggacgggccgcggcacccacctgtctctgttctttgtg
gtgatgagaggacacagcgacgcgctcctcaagtggcctttcaatcagaaggtcaccctg
atgctgctcgaccagaacaacagggagcacataatcgacgccttccggcccgatgtctcc
tcctcgtctttccagaggcccgtcagcgacatgaacatcgccagcggctgcccgctcttc
tgtccgctctccaagctggactcgaagaactcctacatacgcgacgacaccatcttcatc
aaggccattgtagacctcactgggctctag
DBGET
integrated database retrieval system
