Capsicum annuum (peppers): 107840900
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Entry
107840900 CDS
T04646
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03420
Nucleotide excision repair
cann04120
Ubiquitin mediated proteolysis
cann04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107840900
04120 Ubiquitin mediated proteolysis
107840900
09124 Replication and repair
03420 Nucleotide excision repair
107840900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107840900
03400 DNA repair and recombination proteins [BR:
cann03400
]
107840900
Enzymes [BR:
cann01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
107840900
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
107840900
Multi subunit type E3
SCF complex
Ring finger protein
107840900
Cul2 complex
107840900
Cul3 complex
107840900
Cul4 complex
107840900
Cul7 complex
107840900
Cul8 complex
107840900
Cul9 complex
107840900
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107840900
TCR (transcription coupled repair) factors
Cul4-CSA complex
107840900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
107840900
NCBI-ProteinID:
XP_016540332
UniProt:
A0A1U8DZ86
LinkDB
All DBs
Position
9:217052587..217057259
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AA seq
116 aa
AA seq
DB search
MASPDTDVPMVPAGEGSTGAGTSTKKAKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaccggataccgatgttccgatggttcccgccggcgaaggttctaccggagct
ggaacatctactaaaaaggcgaagcgatttgagatcaaaaagtggaatgctgtttcgctt
tgggcttgggatattgtggtagataattgtgccatctgtaggaatcacatcatggatctc
tgtatcgagtgtcaagctaatcaagctagcgcaacaagtgaggaatgcacagttgcttgg
ggggtttgtaaccatgcattccacttccattgcatcagtaggtggctcaagactcgtcaa
gtatgccctcttgataacagcgagtgggagtttcagaagtatggtcactag
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