Capsicum annuum (peppers): 107865045
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Entry
107865045 CDS
T04646
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cann03036
]
107865045
03400 DNA repair and recombination proteins [BR:
cann03400
]
107865045
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107865045
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
107865045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
HATPase_c
Motif
Other DBs
NCBI-GeneID:
107865045
NCBI-ProteinID:
XP_047265405
LinkDB
All DBs
Position
3:complement(230431940..230454254)
Genome browser
AA seq
1613 aa
AA seq
DB search
MSSSKRRREDFSAETPRKRPSRVLRIQLDSDEEEVGDNVEKIFHFRVLLPNGITLELQVP
GPPNNMPVQDFVILLRREYQNYERRTESSPKPKREISWTSKNLHFVDAFENKITKMFDFR
KLKPNESHMLRLLDGSAAVDKYENMWDLTPDTDLLKELPEEYTFETALADLIDNSLQAVW
SNHADQRRLISVELTEYKITIFDTGPGMDGSAENSIVKWGKMGASLHRLSKDKGRGGKPP
YLTPCFGMFGYGGPIASMHLGRRTTVSSKTNNSKKVFVLHLERDSLLRSSSQQTWRTDGN
VRNPLEDEPRDSSFTKVEIFHPRMRSKNIEQLKYQLKDIYFPYIQCDEVSSTGKTTMPIE
FQVNGTNLAEIEGGEVATTNLKSCHGREFVMQLSFHAKDSNDLNVGSGKKSSLEAHARLR
CVYFPVVQGKESIEMILEKLEADGYGVTENFESFSHVSVRRLGRLLPDARWSWLPFMEPK
LRKSDRADVLRRCCFRVKCFIETDAGFNPTPSKTDLAHHHPFTIALRNFGNKPLDKENDV
IVEVSQDGKKLSLLQLEKLYQDWMLQMHDLCDGEIDSGEDQPTFVLNPSHKKELGVTSDV
LRIHKVFRRKGITWKSGQKIKILKGAYRGFHKNHVFATLEYIILEGLPGESGGDPRIICR
PLNVPAERGCSVTCEKGRASIEIRDSKSLPISVIDAVKCLPVDNPEWESQILKHQEKTTP
SSIDILDAEQCRDLDIEGVLPQDVVDAGHEPPDEIAAVIRPASFRVTASKSLDQKCIMKE
NFEMTLEIKFKTDANEKECHIYSGQLTPSSLKGFHGLYMFPLKKNLPDLFQKAGIYLFRF
SLMESHTISVKKVHVKALSEAASWELVSDGESMLSVRVGSCFPEVLSVACCDKFSNNIPF
KSDVEIEMKLSSSGRAISSEFYYDQCITRDRCTMKFKSVTIESSELDMIRPSYKATLHIY
SKEDPLFVAIPCAVIPGPLQRVLLHPVDFGKKLVPGMIIKELALETFDKYGNHLRKDEQI
KLTLDGIHLLDKGDSFPKVDDHGFVTLSETLKVTAGYGKPVSLSVLSGDEVVFKKEFQTE
RRSLRLASKVPEVCPAGSHLEDVVFEVINSAGEVDEDIDGEEEDGRSHTLLIRQDSSREE
DNVRYSFLRGRCIVRSIPLPSNGGLFRFVASHSRFHELQTCIEVHVEKAVISTHEVTQPR
SPKKEILLLEDSCSLKGPETVYDNPYDRSIMLFKDSCASMDLENRQQKLGDDICRYALHI
RECEENLESLNMEESNIELEMSNLGAYIGLDSFHDLGYDKDVVVEKIEGKVDSAAAVIHR
LLRSPQSGQQYLKYAHDILGAVALLGEVRTHKLSSILSTFLGEDQMLAVVCKSHAAARSF
ENYQMDGTVNCVSALDILAAKLGTSIKGRCSIICLDDIRPYTRGVGRYPQRELAFPPPTS
LNGKTPPGFLGYAVNMIFTPAEHLQFRTASGHDLRETLFYLLLGKLQVYQSREYLYMARS
CIEDGAVSLDGGMIRGNGVVSIGSEEPNILFPVNSLERQLPLSHDKVERLKRMEELKLEL
KQRQELIQEKIRTREKYRKKLAKKLKYKKQIDDQLEPSPAMYNSDMDISGASG
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctagcaaaaggcggcgtgaagatttttcggccgaaacgccgagaaagaggcca
tctagggttctaagaatccaacttgattcagatgaagaagaagttggtgataatgtagaa
aagatttttcattttcgggttcttttgcctaatggcataacattggagttgcaagtacct
ggaccaccaaataatatgcctgttcaggactttgttattttattgaggcgagaataccaa
aattacgagcgaagaacagagtcatcacctaagcccaaaagagagattagttggactagc
aagaatttgcattttgtagatgcttttgagaacaagataacaaagatgttcgatttcaga
aagcttaaaccaaacgagtctcatatgttaaggctccttgatggttcagctgcagtagat
aaatatgagaatatgtgggatcttacaccagatactgatttgttgaaggaactgcctgaa
gagtatacgtttgaaaccgcactggcagatttgattgataactcattgcaggctgtatgg
tctaatcatgcagaccagagaagattaataagtgtagaattaactgagtacaagattaca
atatttgacacaggccctggaatggatggaagcgctgaaaactcaatagtaaagtggggg
aagatgggagcttctctacacagactatcgaaagacaaaggcagaggagggaagcctcca
tacttaacgccttgctttggcatgtttggttatggaggaccaattgcctctatgcatttg
gggagacgaaccacggtttcttcaaagacaaacaattctaagaaagtttttgtattacat
ctcgagagagattctctactccgttcttcttctcaacaaacttggaggaccgacggaaat
gttagaaatcccttggaagatgaacctcgagactccagctttactaaagttgaaattttt
catccaagaatgagaagcaagaatatagagcagctaaaataccaactgaaagacatatac
ttcccatatattcagtgcgatgaagtatcaagtacagggaagaccacgatgcctattgag
tttcaggtcaatggcacgaatttagctgaaattgaaggtggagaggtggcaacgacaaac
ttaaagtcctgccatggtcgtgagtttgtcatgcaacttagctttcatgcaaaggatagc
aatgatttaaatgttggttcaggaaaaaaatcatccctcgaagcacatgctcgcctgagg
tgtgtttattttccggtggtgcagggtaaagagagtattgagatgatattggaaaagctc
gaggcagatggctatggagttacagagaattttgaaagtttcagtcatgtctctgtccgc
cgtttaggtcgtctacttccagatgctcgatggtcttggcttcccttcatggaaccaaag
ctaagaaagagtgatagggctgatgtcctgaggagatgctgctttagggtaaagtgcttc
atagagactgatgctggtttcaacccaacaccatcaaagactgacttagcacatcaccat
cctttcaccattgcattaaggaactttggcaacaagcctttagataaagaaaatgatgtt
atcgttgaggtatcccaagatggaaaaaagttgtctctcttgcaattggagaagctatat
caggactggatgcttcagatgcatgatctctgtgatggggagattgacagtggagaggat
caacctacttttgtcctcaacccttcacataagaaagagcttggtgttacttcagatgtt
ctgagaattcataaggtttttcggaggaaaggcataacttggaaatcaggacagaagatt
aaaattttgaagggagcttataggggtttccataaaaaccacgttttcgccactttggaa
tatattatccttgaaggattgccgggggaatcaggcggtgaccctcgaatcatttgcagg
ccattaaatgtccctgctgagagaggttgtagtgtcacatgtgagaaagggcgtgctagc
attgaaatccgcgattcaaaatctttgccgattagtgttattgatgctgtaaagtgctta
cctgttgataatccagaatgggagagccaaattttgaaacaccaggagaaaaccactcca
tcatcaattgacatattggatgccgagcaatgtcgagacttggatattgagggggtgcta
cctcaggatgttgttgatgctggacatgaacctccggatgagattgctgcagttattcgt
ccagcctctttccgtgttaccgcatccaaaagtttggatcagaaatgcattatgaaagaa
aattttgagatgactctagagatcaaatttaaaacagatgcgaatgagaaagaatgtcat
atttactctgggcaattgactccttcatcgcttaaaggatttcatggtctatatatgttc
ccactgaagaagaacttaccagatctatttcagaaagcaggcatttatctatttcgattt
tctcttatggaaagtcatacaatttctgttaagaaagtgcatgtgaaagcattgtctgag
gctgctagttgggaacttgtaagtgatggggagagtatgctcagtgtaagggttggttct
tgttttccagaggttttgagtgttgcatgttgtgataaattctccaacaatataccattc
aaatcagacgtggagatagagatgaagttaagctctagcggcagagctatttcatccgaa
ttctattatgatcaatgcattacacgtgatagatgtaccatgaagtttaagagtgtaacc
attgaaagtagtgaattggatatgattcgaccaagttataaagctacattacatatatat
tcaaaggaggatccattatttgtagctattccatgtgcagttattccaggacctttgcaa
cgtgtccttctgcatcctgtagatttcggcaagaaattggttcctgggatgataattaag
gagcttgctcttgagacatttgacaaatatggtaaccatttgagaaaagatgagcaaatc
aagttgacgctggacggaattcatttactagacaaaggagattcttttcctaaggtcgat
gatcatggatttgtaacccttagtgaaaccttgaaggtaacagcaggatatggtaaacct
gtttccctttctgttttgtctggagatgaagtagttttcaagaaggagttccaaactgag
aggagatcgttgcgattggcatcgaaggtacctgaagtttgtcctgctggttctcatctg
gaagatgttgtctttgaggttataaattctgctggtgaagtggatgaagatatcgatggt
gaagaggaagatggacgctcccatacccttctgataaggcaggattcatcgagggaagaa
gacaacgtgagatacagcttccttcgtggacgctgcatcgtccgctccattcctcttcca
agcaacggagggcttttccgctttgtagccagtcactctcgtttccacgagctgcagaca
tgcatagaggtgcatgtcgagaaagcagtaatcagcacacatgaagtaacccaaccaaga
agtccaaagaaagagattctgcttcttgaggattcatgttccttaaaaggcccagaaacg
gtgtatgataacccctatgacagaagtataatgctcttcaaggattcatgtgcttccatg
gatctggagaacagacaacaaaaacttggggatgatatttgcagatatgccctacacatc
agagaatgtgaagaaaatttggagtcacttaatatggaggaatcaaatattgagcttgag
atgtccaatttgggagcttatatcggtctcgattcttttcatgacttgggctatgataaa
gacgtggttgtggaaaagattgaagggaaggtggacagtgcagctgctgttatccacagg
ctgctcagatcaccacaatctggacagcaatatctcaaatatgctcatgacatacttggc
gcggttgcacttcttggagaggttcggacccataagcttagcagcattctttcaaccttt
cttggagaagatcagatgcttgctgtggtatgcaaatcccatgcagctgccagatctttc
gaaaattatcaaatggatggaactgtgaattgtgtcagtgctcttgacatattagcagct
aagcttggaacttccatcaagggtcgatgttcaattatatgcctcgatgatataagaccg
tatacgcgaggagttggacgatatcctcaaagagaactagcttttcctccccctacttca
ttaaacggaaaaactccaccaggctttttgggttatgcggttaatatgatattcactcct
gctgaacatttgcagtttagaactgcttcaggtcatgatctccgggagacattattttat
cttttgctcggtaagcttcaggtctaccagtctagagagtacctttacatggcacgttcc
tgcatagaagatggtgccgtttccttggatggtggaatgataagaggaaatggagttgta
tctattggatctgaggaaccaaacattctatttccagtcaacagtctggaaaggcagttg
cccctttcacatgataaagtggaaagattgaagagaatggaagagttgaagctggaacta
aaacaaagacaagaactgatacaggaaaagattaggactagggaaaagtacaggaagaag
ttagccaaaaaattaaagtataaaaagcagatagatgatcagttggaaccttctcctgca
atgtacaactctgacatggatattagtggagctagtggttga
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integrated database retrieval system
