Capsicum annuum (peppers): 107876064
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Entry
107876064 CDS
T04646
Name
(RefSeq) RING-box protein 1a isoform X1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03420
Nucleotide excision repair
cann04120
Ubiquitin mediated proteolysis
cann04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107876064
04120 Ubiquitin mediated proteolysis
107876064
09124 Replication and repair
03420 Nucleotide excision repair
107876064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107876064
03400 DNA repair and recombination proteins [BR:
cann03400
]
107876064
Enzymes [BR:
cann01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
107876064
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
107876064
Multi subunit type E3
SCF complex
Ring finger protein
107876064
Cul2 complex
107876064
Cul3 complex
107876064
Cul4 complex
107876064
Cul7 complex
107876064
Cul8 complex
107876064
Cul9 complex
107876064
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107876064
TCR (transcription coupled repair) factors
Cul4-CSA complex
107876064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-RING_16
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
107876064
NCBI-ProteinID:
XP_016578531
LinkDB
All DBs
Position
6:complement(197844464..197848660)
Genome browser
AA seq
127 aa
AA seq
DB search
MATDVEMAPADEGSTVAAPSCCSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGSILIEISSGVCNHAFHFHCISRWLKTRQVCPLDNSEW
EFQKYGH
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgatgttgaaatggctcccgccgatgaaggatccactgttgccgcaccttca
tgctgttcttcttctacgaagaagcctaagcgttttgagatcaaaaagtggaacgccgtt
tctctatgggcttgggatattgttgtagacaattgtgctatttgcaggaatcatatcatg
gacctctgcattgaatgtcaagctaatcaagctagtgctactagcgaggagtgcactgtt
gcctggggaagtatattgattgaaatttcctcaggtgtatgtaatcatgccttccacttt
cactgcattagccgatggctcaaaacccgtcaagtgtgcccattagataacagtgagtgg
gagtttcagaagtatggtcactag
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