Corynebacterium anserum: GP473_05945
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Entry
GP473_05945 CDS
T07289
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cans
Corynebacterium anserum
Pathway
cans03030
DNA replication
cans03410
Base excision repair
cans03420
Nucleotide excision repair
cans03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cans00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GP473_05945 (ligA)
03410 Base excision repair
GP473_05945 (ligA)
03420 Nucleotide excision repair
GP473_05945 (ligA)
03430 Mismatch repair
GP473_05945 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cans03032
]
GP473_05945 (ligA)
03400 DNA repair and recombination proteins [BR:
cans03400
]
GP473_05945 (ligA)
Enzymes [BR:
cans01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
GP473_05945 (ligA)
DNA replication proteins [BR:
cans03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GP473_05945 (ligA)
DNA repair and recombination proteins [BR:
cans03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
GP473_05945 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GP473_05945 (ligA)
MMR (mismatch excision repair)
DNA ligase
GP473_05945 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GP473_05945 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
Motif
Other DBs
NCBI-ProteinID:
QNH96262
UniProt:
A0A7G7YP42
LinkDB
All DBs
Position
1428013..1430145
Genome browser
AA seq
710 aa
AA seq
DB search
MTSASKVADKDPAIRWQELADAVRHHRQAYYYGSAEISDADFDALLRELQQLEAEHPEAV
TGTSPTQEVAPAPPDSSPFRNVDHRDRMLSLDNVFDSEQLTAWLARTPASTYLTELKIDG
ASINLLYVKGKLELALTRGDGTTGEDITHNARTLNDIPDELHATDEFPVPDLVEIRGEVY
ISVDDFAAMNAQRQAEKKKLFANPRNAAAGAMRQKNAEDTAQRPLRLICHGIGAREGFEV
HSQHEAYTAIKAWGLPVSPYTTQVHSAEEVLKQVTYWGEHRHDAAHEMDGLVIKVDSLDE
QLRIGTTSRAPKWAIAYKYPPEEAMTRLRNIRVGIGRTGRATPYAVMEPKYVAGSTVSMA
TLHNPSEAHRKGIRLGDDIMIRKAGEVIPEVLGPVEDKRTGDEREYLYPTLCPECGTALA
PSKEDDADWRCPNNRFCPGQLHTRLTYLAGRGAFDIDALGEKAAYDLIHSGVLDDESGLF
ALTASDLERTTAYTSQTSATERKKNPDKLRKLNKAGRTLLEKLEDAKQVDLWRVIVALSI
RHAGPTAAKALAKHFGSVEAIKDASTEEMAAIDGVGPIIAQSVADWFAVDWHRAIIEAWQ
SAGVRMEVPSSDATTDYPAGTEQPAVDAELLAGLVIVVTGTLENFDRTGAKEAIEDRGGK
ATGSVSKKTDFLVAGDKAGSKLTKAMDLGVPVLNEEGFQRLLAHGAAAVR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgactagtgcgagcaaagtagcagacaaagatccggcaatccgatggcaggagctggcc
gacgccgtacgccaccatcgtcaggcgtactactacggcagcgcggaaatctcggacgcg
gacttcgatgccctactgcgagaattacagcaattggaggctgaacaccccgaagctgtg
acaggcacatcccccacgcaggaggtggctccagcaccgcccgatagttctcccttccgc
aatgtcgaccaccgtgatcggatgctgagcctggacaacgtcttcgatagcgagcaactc
acagcatggctcgcacgcacgcccgcaagcacctacctcacagagctcaagatcgatggg
gcatccatcaaccttctctatgtcaaaggcaaactggaacttgctctcacccgcggcgac
ggcaccacaggcgaggacattactcacaacgcacgtaccctgaacgatatccccgacgag
cttcatgccaccgacgagtttccagttcctgatttggtagagatccggggggaagtctat
atctccgtcgatgactttgcggcgatgaacgcacaacgtcaagcagaaaaaaagaaacta
tttgcaaatccccgcaacgctgcagcaggtgctatgcgccagaaaaatgccgaagatacc
gcacaaaggccgctccgcctgatttgccacggcattggtgcacgggagggcttcgaggtg
cacagccaacacgaggcctacacagcaatcaaggcgtggggtctacctgtcagtccgtac
accacacaggtacattcggccgaagaagtgctcaagcaagtgacgtactggggtgagcac
cgccacgatgctgcccatgaaatggacggtcttgtcattaaagttgattcactggatgaa
cagctgagaattggcactaccagcagagcaccgaagtgggccatcgcttataaataccct
ccagaagaggcgatgacccgcttacgcaatatccgcgtgggaatcggtcgcaccggccgc
gccaccccctatgcggtgatggaaccaaaatacgtggcaggttccacggtgtcgatggcg
accctgcataacccttccgaggcacatcgcaaggggatccgcttgggcgatgacatcatg
atccgcaaggccggcgaggttattccagaagttttaggccccgtagaggataagcgaacc
ggcgatgagcgggaatacctctatcccacgttatgtcccgaatgtggcactgccctcgcc
ccgtctaaagaggacgatgcggactggcgctgccctaacaaccggttctgcccaggtcag
ttgcacactcgcttgacctatttggcggggcgcggcgctttcgacatcgatgctctcggc
gaaaaagctgcctatgatctcatccactctggggttctcgacgacgagtctggactgttc
gccctcaccgcgtcggatctggaacgcaccacggcctacacatctcaaaccagcgccacc
gaacgcaagaaaaatcccgataaactgcgcaaactcaataaagccgggcgcactctgcta
gagaaactagaagacgccaaacaggtggatctatggcgcgtgatcgttgccctttcaatc
cgccacgctggtccgacagcggcgaaagcattggctaagcactttggctctgtcgaagca
atcaaggatgcgtcaaccgaggaaatggcggcgatcgacggagtgggacctatcatcgct
caatcggtggcagattggtttgccgtggactggcaccgcgcgatcattgaggcctggcag
tccgccggggtgcgtatggaggttcctagttccgacgccaccactgattatcccgccggt
accgaacagcccgcggtggatgccgaattactggcaggtctcgtcatcgttgtcaccggc
acactggaaaacttcgaccgtacgggagcgaaagaagccatcgaagaccgcggtggcaag
gcaaccggcagcgtgtctaagaaaactgattttctcgtcgctggtgacaaggcaggatcc
aagctaacgaaggctatggatctcggtgtgccggtgttgaacgaggaaggcttccaacgg
cttctcgcacacggtgcagctgctgttcgctag
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