Magallana angulata (Portugese oyster): 128155390
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Entry
128155390 CDS
T09348
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04137
Mitophagy - animal
canu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128155390
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128155390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128155390
04121 Ubiquitin system [BR:
canu04121
]
128155390
Enzymes [BR:
canu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128155390
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128155390
Ubiquitin system [BR:
canu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128155390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF_BIRC3_bd
TRAF3_RING
zf-C3HC4
zf-C3HC4_4
TRAF2_zf
CEP104_ZnF
zf-C3HC4_2
PAS_10
zf-RING_UBOX
DUF16
Macoilin
Phage_prot_Gp6
AAA_13
YlbD_coat
DUF5082
ALIX_LYPXL_bnd
DUF3450
Crescentin
DUF6730
Motif
Other DBs
NCBI-GeneID:
128155390
NCBI-ProteinID:
XP_052673041
EnsemblRapid:
LOC128155390
LinkDB
All DBs
Position
7:57720882..57732737
Genome browser
AA seq
536 aa
AA seq
DB search
MASQQGVGGYNVEIFMGENFDRKFLCNHCSLILRDPVQSYCGHRFCRSCMESIIRSHEQV
RCQSCIEEGTMDEEYSILKMDQMFPDNAVRREMGAMAAKCINPNCTWKGIFKQYEAHVAE
CKFKQVPCQLCGNLIEPQALQDHMTKECTKRKIACKHCQSEVIVENLEAHNAECPKMPIK
CDSCGKKKIPRDKMQHHIDKECSNQKVPCLTDCGDISRDKFVEHLDKRPGIHLKALVEEL
NSFRNDINSRLEAVVVQTDLGQFISHITELKQKVQQHEQLIQTLQGHQAANGTPANSNPS
VIQAKVQALELKTGTFEGIVTTLHREIERCITAIENVERGRQGEKQVVDSLEKKIRALER
SISLKDVALAEQELRIKTLELTTYDGTLFWKISEWSKRRSEAQSNHVTSLYSPIFYSSKN
GYKMCARLYPNGDGMGKNTHMSIFFVVMRGNFDALLQWPFSFRVTFMLLDQNNKEHQVDS
FRPDPNSSSFKRPTTEMNIASGCPLFIPLAKLDDPSLAYVKEDTMFIKLVVDVPRG
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcacaacaaggtgtaggaggctacaatgtagagatatttatgggggaaaatttt
gacagaaaatttctgtgtaaccactgtagtttgattttgagagaccctgtacaaagttat
tgtggtcacagattctgtcgatcatgtatggaaagcatcatcaggtcccatgaacaagtg
agatgtcagtcctgtattgaagaagggacaatggatgaagagtacagtatactgaaaatg
gaccagatgttcccagacaacgcagtcagaagagaaatgggagccatggctgctaagtgc
atcaatcctaactgtacatggaaaggaatcttcaagcagtatgaagctcatgtggccgag
tgtaaatttaagcaagttccctgtcaactgtgtggtaacttgattgaaccacaggccctc
caagatcacatgaccaaggaatgtacaaaaagaaaaatcgcctgcaagcactgtcagtca
gaggtcatagttgagaacctggaggcacataatgcagaatgtcccaaaatgcccatcaaa
tgtgactcttgtggcaagaaaaaaatacccagagacaagatgcagcatcacatagacaaa
gagtgttctaatcagaaggtcccctgcctcacagactgtggtgatatcagcagagataag
tttgtggagcatctggataaacgtcctggaatccacttaaaagctttagtggaggagtta
aactctttccgtaatgatataaactcaaggcttgaagcagttgttgttcaaactgacctt
ggacagtttatttcacacatcactgaactcaaacaaaaagttcagcaacatgagcagctg
attcaaactctacaaggtcatcaagcagccaatggcacaccagcaaattcaaatccaagt
gtgatacaggccaaagttcaggccttggagctgaagacaggtacctttgaaggcattgtt
acgacacttcacagggaaattgaacggtgtattactgcaattgagaatgttgagaggggc
aggcagggtgaaaagcaagtagtggatagtctagagaaaaagatacgtgctctggagagg
agtatctcactgaaggatgtagctcttgctgaacaggaactgcgaataaagacgctggaa
ttgacgacttatgatggaacgctgttctggaagatttctgagtggagcaagcggcgatcg
gaggcacagagcaaccacgtgaccagtctctactcccccatcttctactccagcaagaat
ggctacaagatgtgtgccagactctaccccaatggagacggcatgggcaaaaacacgcac
atgtcaattttctttgttgtcatgagaggtaactttgatgccttacttcaatggccattc
tcattccgtgtgacattcatgctcctcgatcagaacaataaagaacaccaggtggactca
tttcgccccgacccaaacagtagctctttcaaacgccccactacagagatgaacattgcg
agtgggtgccccctctttattccgcttgccaaacttgacgatccaagtcttgcgtatgtc
aaggaggacactatgtttatcaaactggtggtagatgtaccaaggggttga
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integrated database retrieval system
