Magallana angulata (Portugese oyster): 128165294
Help
Entry
128165294 CDS
T09348
Name
(RefSeq) TNF receptor-associated factor 6-B-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04120
Ubiquitin mediated proteolysis
canu04140
Autophagy - animal
canu04144
Endocytosis
canu04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128165294
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128165294
04140 Autophagy - animal
128165294
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128165294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128165294
04121 Ubiquitin system [BR:
canu04121
]
128165294
Enzymes [BR:
canu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128165294
Membrane trafficking [BR:
canu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128165294
Ubiquitin system [BR:
canu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128165294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-TRAF
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
zf-Nse
zf-RING_2
zf-RING_5
zf-TRAF_2
TRAF3_RING
zf-C3HC4_3
Sina_ZnF
RING_XB3-XBAT31
TRAFD1-XIAF1_ZnF
BRISC_FAM175B_helical
SKA2
TRAF2_zf
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
128165294
NCBI-ProteinID:
XP_052685649
LinkDB
All DBs
Position
10:complement(6482026..6494830)
Genome browser
AA seq
282 aa
AA seq
DB search
MSNRRRNQVTAPPESPRSYDAAFCSDLDRKYLCPVCLSALHEPMQTSCGHRFCKTCIQGV
INGRANAKCPVDNVVFKCNDELFEDKAFQREVLSQTVKCGNHDKGCTWTGELRSYQEHDA
RCQYVSVHCENNCGLRIPRHQLTDHADVCERRPVDCQHCNSQIPFTDLTKHQVLACQNLP
VQCTLCGQAGIRRKDISAHIDITTGDCPLTVIPCQYASFGCQFQDKRRDMVEHYREAANH
HILLLVRKISDQEQRISALEREVQLIQQEQEDQKQALQQVQP
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacagaagaagaaatcaggtgaccgctccccctgagagcccgcggagctatgat
gctgcgttctgctcggatcttgaccggaagtacctctgccccgtctgtttgtccgccctc
catgaaccaatgcagacttcctgtggacaccggttctgtaaaacctgcattcagggtgtg
atcaatggaagagctaatgccaagtgcccagtggacaacgttgtattcaaatgtaatgac
gagctttttgaagataaggccttccagagagaggtgttgtctcaaacagtgaagtgtggt
aaccatgacaaaggctgcacgtggaccggagaactccgctcctatcaggagcatgacgct
cgatgccagtacgtctctgtacattgcgagaacaactgtggactgaggattccccgccac
cagctgacagaccatgcggacgtctgtgaacgccgtcctgtcgactgtcagcactgtaac
tcacagattcccttcactgacctcacgaagcaccaggtgctggcgtgccagaacttgcca
gtccagtgtactctgtgtggacaggctgggataagaaggaaggatatctccgcacatatc
gacatcaccactggtgactgccctctcactgtcatcccctgtcagtatgcctctttcggc
tgccaattccaggacaagcggcgcgacatggtggaacactacagagaggccgccaatcat
cacatcctgttgttggtccggaagatttccgaccaggagcagagaatctctgccttggag
agggaggtccagctaattcaacaggaacaggaggaccagaaacaagctcttcagcaggtt
cagccatag
DBGET
integrated database retrieval system
