Magallana angulata (Portugese oyster): 128168261
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Entry
128168261 CDS
T09348
Name
(RefSeq) guanine nucleotide exchange factor C9orf72-like
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128168261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128168261
Membrane trafficking [BR:
canu04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
128168261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
HI0933_like_1st
Motif
Other DBs
NCBI-GeneID:
128168261
NCBI-ProteinID:
XP_052690417
LinkDB
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Position
10:complement(29091733..29097284)
Genome browser
AA seq
485 aa
AA seq
DB search
MSASKNIKKIIRNMSAGVIQIGSQEKEEPVHSFSGEITPLSPSSKFTESSIDIPGQNLIK
YMMLSHWDNILGPRVVHVWNMGTDSLDSGFLSRISSQSLSGEICREVTSFIDHKMYEIPD
ADVFVTAFIFTAMGISGPCVHTLSIVIQKSDMTFFLNIQQLFLKCFERIIRKFKVNLDQV
SLDSTFESTYKDFDDCCHPCIENIGYLKKSVFPQKIVLSSTYLCPAHHLDRDFLSCCISS
HLSTFGRSLVIGDKVDTVNMMLKTLSLFNSPKERYCSRLVQQNEPSQYHHDMWLQGQVQT
SDHLDLPVPEILYSGYPTTMIDLSQKMVRESPPYSEHVTHAQDQWYNELVGLQYGMVEPC
IPQGELFSQHEKLDTLVSGLLDELDKLPSDCGVREAYIQQFNRSIQYKALCIIKYVEGET
NSGTIPFRGEYKKLQKDVCILSEGDFRIYLSAAEKLKPGLIGFLYSKYSREHSNSGLSTS
KPYVR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcttccaagaatattaagaagatcattcggaacatgagtgctggtgtgatccag
attgggagtcaggaaaaagaggagccagttcattctttctcaggggaaataactcctctg
agtccttcatccaaattcacagaatcaagcattgacattccaggacaaaacttgatcaaa
tacatgatgctgtctcactgggataacattcttggaccacgagtggtgcatgtctggaat
atgggaaccgattctttggattccggtttcttgtcacgcatcagtagtcagagtttgagc
ggggagatctgccgtgaagtgaccagtttcatagaccacaagatgtatgaaatcccagat
gctgatgtttttgtgactgcatttatctttacagccatgggtatcagtggcccttgtgtt
cacacactgtctatagtgatacaaaaatcagatatgacattctttttaaatatacagcag
ctgtttctgaagtgttttgaaagaataattcggaagttcaaagttaatcttgatcaggtt
tcacttgactcaacatttgaaagtacttacaaggattttgatgattgttgtcatccttgc
attgaaaacattggatacctgaaaaagtctgtctttccacagaaaattgtgctgtcttct
acatacctgtgtccagctcatcatctagaccgagactttctgagttgctgtattagctca
catctatcaacatttggtaggagcttggtcattggggacaaagtagatactgttaacatg
atgttaaaaactttaagtttgtttaattcacctaaggaaagatactgttccagacttgtt
caacagaatgaacctagccaataccaccatgatatgtggctccagggccaagtccagaca
tctgaccatttggatctgcctgttcctgaaatcctatacagtggctaccccactacaatg
atagacctgtctcagaaaatggttcgggaatcccccccatacagcgaacatgtgacccat
gcccaggaccagtggtacaatgagctggtaggactacagtatggcatggtggagccctgc
attccccaaggagaattattctctcaacatgaaaaattagacaccctagtctctggatta
cttgatgaacttgacaagctgccgtcagattgtggtgtacgagaggcttacatacagcag
tttaaccgaagcatacaatataaggccctgtgtatcatcaaatatgtagaaggcgaaaca
aattcaggaaccattccatttagaggggaatataagaaactccaaaaggatgtatgcatt
ctttctgaaggcgacttcaggatttatttgtctgcggcagagaaactaaagccaggattg
attggatttttatactcaaaatattctcgagaacattcaaattctggcttgtccactagt
aaaccttatgtacgataa
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