Crassostrea angulata (Portugese oyster): 128176609
Help
Entry
128176609 CDS
T09348
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
canu
Crassostrea angulata (Portugese oyster)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
zf-C3HC4_2
zf-C3HC4
Sina_ZnF
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-RING_5
TRAF3_RING
SHE3
Prok-RING_4
ADIP
PRKG1_interact
HALZ
TMPIT
ALMT
DUF5082
Csm1_N
Motif
Other DBs
NCBI-GeneID:
128176609
NCBI-ProteinID:
XP_052699013
EnsemblRapid:
LOC128176609
LinkDB
All DBs
Position
3:30627273..30641367
Genome browser
AA seq
556 aa
AA seq
DB search
MELSLVSPGASIFTAELPQFVHKLTDKYVCPVCELVLRNAMQLPCGHQICEPCIDTLFGE
SDNATCPVKDDEYCEQPFPKNQIHKDMCTRREVMSLPVFCEYSKDGCKETPLWKNLKKHI
EECEYRPVECNECQEKTPLNNLPNHKEMECSFRVVVCDHCSQNIPHCQMQSHLDHDCTEY
PLKCPNGCENITLPRNEMESHLHSCPKRSIPCGYRSIGCEFFGVITEVEKHQVKATDQHL
MLALSFSGQTSDENKALHTKIEESKIEIEELKLTIQQLHQDNQRLKEEITPLVKSVTKDM
KKKLVTLTERLINLERMVEHQPKREVLEKQEQAISSLKDDIKVSQEQITQLERAGPQGGR
SQALVPQDVKNQLKTNEKQMAIQDIRLAELDLRFQVLETASYDGILMWKIRDYYRRKQEA
KSGRTLSLYSQPFYTSRTGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFQQ
KVSLMLLDQETFRRHVCDTFQPDTTSSSFKRPTTEMNVATGCPLFISHSVLETKTYLNDD
TIFIKVKVDSTNIPVP
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggagctatcattagtatctcctggtgccagtatttttactgcggagctgccgcaattt
gttcataaactgacggataaatatgtttgtcctgtgtgtgagcttgtgttacggaacgcc
atgcagctgccgtgtggacatcagatatgtgaaccctgtattgatacgctttttggagaa
agtgataatgcaacctgtcctgttaaagatgatgagtattgcgaacagccatttccaaaa
aatcagatacataaggatatgtgtacaaggcgtgaagtgatgtcacttccagttttttgt
gagtacagcaaagatggctgtaaggagactcccttgtggaaaaatctcaagaaacatatt
gaagaatgtgaatatagaccagtggagtgtaatgaatgtcaagaaaagacccctctgaat
aatctgccgaatcataaagaaatggagtgcagcttccgtgtggttgtatgtgatcattgc
tcccaaaacattcctcactgtcagatgcagagtcatcttgatcatgattgtacagagtat
ccgctgaaatgtcctaatggctgtgaaaacataacgctacccagaaatgagatggaaagt
catcttcattcctgtcccaaaagatcaattccttgtggatacagaagtataggttgtgaa
ttcttcggagtgattacagaggtggagaagcatcaggtgaaggcgacagatcagcatttg
atgctggcactgtccttctctggtcaaacaagcgacgaaaacaaagcattacatacaaaa
attgaggaaagcaaaatagaaatagaagaattgaaattaactatacaacaactgcatcaa
gacaatcaaaggttgaaagaagaaattacgcctttagtaaaatctgtcacaaaagacatg
aaaaagaaattagtaacattgaccgaaagattgataaacttggaacgaatggttgaacac
cagcctaagcgggaagttttggaaaaacaggaacaagcaataagttcactaaaggatgac
attaaagttagccaggagcaaataactcagttggagagagcaggaccacaaggtggacgt
tctcaggcattagtacctcaagatgtgaagaatcagctgaagacaaacgagaagcagatg
gctatacaagacatcagacttgcagaactagacctgagattccaagtgctggagactgcc
agttacgatggcattttaatgtggaagatcagggactattacaggagaaaacaagaagcc
aagagtggaagaacactctcgctgtacagccagccattttacaccagtcgcacgggctac
aaaatgtgcgccagagtttacttgaacggtgacggtatgggtaaagggactcacttgtct
ctgttctttgtggtgatgaggggtgagtacgatgctctccttccctggcccttccaacag
aaggtgtcgctgatgctcttggaccaggaaactttcaggagacatgtttgtgacacgttt
cagccggacaccacaagcagcagttttaaacggcccacaacggagatgaatgtggcaact
ggatgccccctgtttatttctcacagtgtgctagaaaccaagacatatctgaatgatgac
acaatattcattaaggtcaaagtagactcaactaacataccagttccctag
DBGET
integrated database retrieval system
