Magallana angulata (Portugese oyster): 128178437
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Entry
128178437 CDS
T09348
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128178437
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
Sina_ZnF
zf-C3HC4
zf-C3HC4_2
zf-TRAF_2
TRAF3_RING
zf-RING_5
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-C3HC4_5
zf-C3HC4_4
RIF5_SNase_1
EzrA
PPi_PEPCK_C
Motif
Other DBs
NCBI-GeneID:
128178437
NCBI-ProteinID:
XP_052701557
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All DBs
Position
3
Genome browser
AA seq
581 aa
AA seq
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MNYVLFILVIAGLVVIYTLMLTPQITPPSSLSSQTPPGHPEFVGVDSKYVCVLCNNVLQD
AVQTQCGHRLCQPCVDTYLQDGQPRPCPYQEEFCEMLQADQILRDASARREIRQLPVYCS
NKSRGCQKTLKWKELEKHLTECWFEPLPCPYKDWGCQEPVLRGSLTDHRQTCQYTPVNCQ
FCGEQVPKLSLETHKNETCNKIPIPCPFGCGIDPVPRNEMSTHQESCPKRPVVCKFASVG
CTFQGPAEELELHERQNTEEHIQQATLKMADVDLYRIDIRKEVQELSVHRQDARQKVNDI
KKEIQDIKNMLDDVRRQDRKRKIDMVDLTERIIRVEKQLEEVSKPEVQQRMTSDLNIARE
NVRKLKDRLDRLIAAEESGGGATAVGTVEIPDPFADLQQQTRQLGLQEARLSELDIRFQI
LETLNYEGVLIWKITNYRRRKQDAVSGTAVSIYSSPFFTSRYGYKMCSRAYLNGDGMGKG
THFSIFFVVMQGEYDALLSWPFRQKVTFMILDQNGNRRHLSDSFRPDPDSSSFKRPLAEM
NIASGCPLFVSHSILESSDNYIKDDCLFVKVMVDTTGLNPI
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaattatgtactttttattctagtaattgcaggattggttgtcatatacacattgatg
ttgacccctcagatcactcccccgagcagtttgtcgtcccagaccccccctggacaccca
gagtttgtaggagttgactccaagtacgtgtgtgttctgtgtaacaatgttctacaggac
gccgttcagacccagtgcggtcaccgtctctgtcagccatgtgtggacacctatctccag
gacggacaacctcgaccttgcccctaccaggaggaattctgtgagatgctgcaggcagac
cagattcttagagatgccagtgcacgaagagagattcgacagcttcctgtttactgttcc
aataaatccagaggatgccagaaaaccctcaaatggaaagagctggagaaacacttgact
gagtgttggtttgaacctctcccttgtccctacaaagattgggggtgtcaggaaccggtc
ctgcggggaagtctgacggaccaccgacagacctgtcagtacactcccgtcaactgtcag
ttctgtggagaacaggtgcccaagttatcactcgagacacataaaaatgaaacctgcaat
aaaattcccattccttgtccatttggttgtggcattgatccagttccaagaaatgagatg
tccactcatcaagagagctgtcctaagcgacctgtagtctgtaaattcgcctctgtgggc
tgtacatttcagggaccagcagaagagttggagcttcacgagagacagaacactgaggaa
catatacagcaggccacactcaaaatggctgacgttgacctctacaggatagacattagg
aaagaagtccaggaattaagtgtccatagacaagatgctcgacaaaaggttaatgacata
aagaaagagatacaggatataaagaacatgctagatgacgtcaggcgtcaggatcggaaa
agaaaaattgacatggtagacttgacagaaagaattattcgtgtggaaaaacagttggag
gaagtctccaaaccagaggtacagcagagaatgaccagcgatctgaacatagcacgggaa
aatgttaggaaacttaaggaccgcctggacagactaatagcagcagaggaatcaggggga
ggggccacagcagttggcactgtcgaaatcccagacccttttgccgacctacagcaacag
accagacaactaggtcttcaggaagctcgcctctcggagctcgatatccgattccagatt
ctagagaccttaaactatgaaggtgtgttaatctggaaaatcacaaactaccgacgacgg
aaacaggatgcggtgtctggaacagctgtttccatctatagctctccgttttttaccagt
cgttacggatacaaaatgtgttcacgggcttatctgaatggtgatgggatgggaaaaggc
acacacttttctatattttttgttgtgatgcagggggagtacgatgcactcctgtcgtgg
cctttcagacagaaagtgacattcatgattctggaccagaatggaaacaggagacatttg
tcagattcttttagaccggacccagacagttcaagctttaagcgaccacttgctgagatg
aacattgcctctggatgtcccctgtttgtcagtcactctatcctagaatcttcagataat
tacataaaagatgactgtctttttgttaaagtgatggtagacactacaggacttaatcca
atttaa
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