Magallana angulata (Portugese oyster): 128187966
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Entry
128187966 CDS
T09348
Name
(RefSeq) telomerase-binding protein EST1A-like
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128187966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128187966
03032 DNA replication proteins [BR:
canu03032
]
128187966
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
128187966
mRNA cycle factors
Common to processing body (P body) and stress granule
128187966
DNA replication proteins [BR:
canu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
128187966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
Motif
Other DBs
NCBI-GeneID:
128187966
NCBI-ProteinID:
XP_052714656
LinkDB
All DBs
Position
6:10463607..10479495
Genome browser
AA seq
1724 aa
AA seq
DB search
MASKSEIVRITYKELESSVQDKDRSHRYTDKSSNDEAQKKRSKRPTRGIYQPPRRSPKVL
DNTGRGSQGENWDDEEIPSSAESKENSSEREIDDVSSNLKDLHLSRENFDPKKQRSKRPE
IQRYVPKGRILEQQTKDDDVSESETNVDVSPRKIDLKNDQQDLKVTVVVNEGASSPAQPS
VGAKPEPKLPPNPHNPLDRTTKGESPKRLQSKTDTGNQSRGGQSGPQSNKPRHQRDSENK
PKSGGRNSEEKRFGGGEAAQKKGPQHSGHSGPGQGKQYDRGSRDNEFRRGESKRGGFGRG
RDNKRGGWQEEEPKPQRQPRERRDRVAESSGSDQKKADSAEREQGMKDIIPTMVFERKNG
SNSPAESENSKQVQVTSGSNNGNGKPGSKRYSLSAMRRPRAGSISSDVSNTSDLSMDEET
TNRILDWSVEVEREMAEQIQDETPKLQEYLDQKGGFNDWDGAIETVDKARQALERGQQMQ
RSGEERGYGKQGNRQYGNTKNFKNDRNYQDSHKEYENGFRQRRNSDGARSRRKDRHRKGS
SAGRRSRDSSVSSAHSVRSYHTEDDMYGTDTWPRRRNRRRGSNASLKESRSKEVLNDPTS
LNLKVTFARDEKRQVLMKDRESPKGRGRGRGRGHREDREDVNVGKHSDNYHRKGFEDKQG
GRNGRASGNEFRQRRTSGDKRDGYGHYETKGGREYDHRYDRRNFGGHQTERERRKSPEST
AHGGGIIKLPTNTDTSETHPQGQSSKQHVEFHTSGHRGERNRLAPRETHSHGNTGQRMLF
DPKNPEKMIVVPGPAPSTPTSQLKFKDPSGSESPQSPPSQQHPLMPPPGGFPTMPSQYRG
YPPFYGGYDPRYPDPMYGGAPMPGPPMPGYYYGYPGMYRENPMFREDNAEFPGDGEIDPM
YAGRSRAQCRMMAEHMFQEACHMDSQLSELVSRRQSADTLQHVYRLRHELQQKLEHIILL
DVEVASKHNAEQLLWKSVYYQVIEMFRRQLSEDKEGEGPKTELSKILDEGTTFFDKLLEK
LQQKYGFDVEDYMESSLASQENQSRHVKLAILSIQRLMINLGDIARYREQMNHSGKVNYG
RARSWYTKAQMLAPKNGRPYNQLAILGLYTRRKLDAVYYYMRSLAASNPFLTAREGLLNL
FDEARKKVLAVEQKKEEEREKVKKLAPQKPHHGQRIEIWVSPDGTSSEGKTEDKDEDDLD
KLEAVELNKRFNLSFLNVHGKLFTKVGRENFPECCGQMLKEFQALLRYGALPPTRLIQLM
AINMFAIENTALKDPSMAEDFRSELQEHAVQLGLDMFGILLDCCAGELNKHLASSDYPSH
MFSRELEELIPGVKKWTDWMLANLKLWNPPPSLRDTALGPGVDVWKVTAKFANILKDVDV
SHVKLYEDRREGCEPVVLFEDTMLSGFVPLMSAPLKLAFVHSTVDKDIARDCLRIQVLQE
FADYLCGVEPPMLEFDVAKKEYYSVAPSTDYSEAPHGDLPSDSDEEAEVIVESEEEVAEE
AEGDEHVRHLRQKKEELSKRKEQKLRDKENIQKLIEKDRHRCIELEIHPIFLIPDTNCFI
DHFSSLKQLIQLKKYTVVVPLIVINELDGLAKGSKEGQYDSTEQATKVRERSKQTVEFLE
EEFEKKNSHVKALTSKGNVLETISFRSEEGDSSGGINDDIILSCCLHYCKDKAREFMPKD
KDAPVRLYREVVLLTDDRNLRLKAHTCNVPVKDVLSFLKWSKIT
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaatctgaaatcgttaggataacatacaaagaactggagtcttctgttcaa
gataaagacagatcacatcgatataccgacaaaagtagcaatgatgaagcgcaaaaaaag
agaagcaagaggcccacaaggggtatatatcagcctccaagacggtcccctaaggtgcta
gacaacacgggaaggggttctcagggggagaactgggatgatgaggaaattcctagttct
gcagaaagcaaggagaacagctctgagcgagagattgatgatgtgagttcaaatctgaaa
gacctacatcttagcagagaaaattttgatccaaagaaacaacggtcaaaaaggcccgaa
attcaaagatatgtccctaagggcaggatactggaacaacaaaccaaagatgatgatgtc
tccgagtcagaaactaatgtggatgtttctccacgaaaaattgatttgaaaaatgaccaa
caagacttgaaagtgacagtggtggtgaatgaaggggcatcatcccctgcccagcccagt
gttggagcaaaacctgagcctaagcttcctccaaatccccataatccactggacagaaca
actaagggggaatctcccaaaagactacagtcaaagacagacactggaaaccagtccagg
ggaggtcaatctggtccgcaatccaataaaccaaggcatcagagagacagtgaaaataaa
ccaaagagtggtggaaggaattctgaagagaaaaggtttggaggtggagaggctgctcag
aaaaagggaccgcaacacagtgggcacagtgggcctggtcaaggcaagcaatatgataga
ggtagccgtgataatgagttcaggaggggggagtctaaaagagggggatttggtagaggg
agagataacaagagaggtggctggcaggaggaagaacctaaacctcaaagacagcctaga
gagaggagagacagggtggcagagagtagtgggagtgaccagaagaaagcggacagtgct
gaaagggagcaaggcatgaaagacatcataccaaccatggtgtttgagagaaagaatggg
agtaattctcctgcggaatctgaaaactccaaacaggtccaagtcacatcaggtagtaat
aatgggaatggtaagcctggatctaagaggtattcactgtcagccatgaggcgtccaaga
gcaggcagcatcagcagtgatgtaagcaatacaagtgatctcagtatggatgaagagacc
acaaaccgaattctggattggagtgtggaagtagagagagaaatggcagaacaaattcaa
gatgaaactccaaagctgcaggaatatctggatcagaaaggtggatttaatgactgggat
ggagccatagaaacagtggataaagccaggcaagctttagaaagaggtcagcagatgcag
agatctggcgaggaaagaggctatgggaagcagggaaacaggcaatatgggaataccaaa
aattttaaaaatgacagaaattatcaggatagtcacaaggagtatgaaaatggtttcaga
caaaggagaaatagtgatggggcaaggagtcgaaggaaagacagacacaggaaaggatcc
agtgctggaagacgtagtcgtgattccagtgtgtccagcgctcacagtgtcaggagctac
cacacagaagatgatatgtatggaacagacacatggcccagaagaaggaaccgtagaagg
ggcagcaatgccagtttgaaggaatctcgcagcaaggaagttctaaatgatccaaccagt
ttaaatctgaaagtgacatttgcaagggatgaaaaaagacaggttttgatgaaggataga
gaaagtcctaaggggagagggcggggcagggggcggggtcacagagaggacagagaggat
gtcaatgtgggcaaacactcagacaattatcataggaaagggtttgaagataagcaggga
ggacgtaatggaagagcttcagggaatgaatttcgacaacgaagaacctcaggcgataaa
agagatggctatggtcactatgagacaaaaggtggaagagagtatgaccatagatatgat
cgcagaaattttggaggacatcagacagagagagagcgaagaaaaagtcctgaaagtact
gcacatggtgggggaataataaaactccccactaacacagacacttcagaaacccatcct
caaggccagagcagtaaacagcatgttgagttccacacttcagggcacagaggagaaaga
aaccgacttgcccccagagaaacccattctcatggaaatacagggcagagaatgttattt
gatcctaaaaatccagaaaagatgatagtggtgccaggacctgccccctctacccctact
tctcaactcaaatttaaggacccctctggttcagaatctccccaatctcccccctcacag
caacaccccttgatgccccctcctggaggttttcccacaatgccttcccagtatagaggc
taccctccattttatggaggctatgatcctcgctatccggaccctatgtatgggggagct
ccaatgcctggccctccaatgcctggctattactatggatatccagggatgtaccgagaa
aacccaatgttcagggaggataatgctgaatttccaggggatggtgaaattgaccctatg
tatgcaggcagatctagagcccagtgcaggatgatggctgagcacatgtttcaggaggca
tgtcatatggactctcagctctctgaacttgtgtccagacgacagtctgctgacacctta
cagcatgtgtataggctaagacatgaactgcagcagaagttggagcacataattctgctg
gatgtggaggtggccagtaaacacaatgcagagcagctgctgtggaagtctgtgtactac
caggtgatagagatgttccggcgacagctgtcagaggacaaggagggggaggggcccaaa
acagaactctccaaaatcctggacgagggcaccacattctttgacaagctactggagaaa
ctgcagcagaagtatggctttgatgtggaggattacatggagtccagcctggcctctcag
gagaaccagagtcgccatgtcaagctggccatcctctccatccagaggctcatgatcaac
ctcggcgacatcgcccgctaccgcgagcagatgaaccacagcggaaaggttaactatggg
cgggctagaagttggtacaccaaagctcaaatgttggctcccaagaatggacgtccatac
aaccagctggcaattcttggcctctacacaaggaggaagctagatgcagtgtattactac
atgaggagtctcgccgccagtaatcctttccttacagccagggagggtcttctcaatctg
tttgatgaagccaggaaaaaggtcttagctgttgagcagaagaaggaagaggaaagagaa
aaagtgaaaaagttggctccacaaaaacctcaccatggtcagcgaatagaaatctgggtc
tcaccagatgggacaagctctgaaggaaagacagaggacaaagatgaggatgaccttgac
aaactggaggctgtagagctgaataaaagatttaatctgagcttccttaatgtccatgga
aagctgtttacgaaagtagggcgggagaacttcccagaatgctgtggacagatgctgaaa
gagttccaggctttgctgcgctacggagctttgccacctaccagacttatacagctcatg
gccatcaatatgtttgctatagaaaacacagcactgaaagatccgtcgatggcagaagat
ttccgatcagagctccaggaacacgcagtacagttaggattggacatgttcgggattctc
ctggactgctgtgcaggggagttaaataagcacttggcctcttctgactaccccagccac
atgtttagtcgggagcttgaggagctgattcccggggtgaagaagtggaccgactggatg
ctggccaacctgaagctgtggaacccacccccttctctcagggacaccgcacttgggcca
ggtgtggatgtgtggaaagtgactgcaaagtttgccaacattctgaaagatgtggacgtc
agtcatgtcaagttatatgaggacaggagagagggctgtgagccggttgttttgtttgag
gacaccatgctatctggatttgttcccctcatgagtgccccattaaaactggcttttgtc
catagcactgtagacaaggacatagccagggactgtttgcgtattcaggttctacaggag
tttgccgattacctctgtggggtggagccacctatgctggagtttgatgtggccaagaaa
gagtactactcagtggcaccctctaccgactatagcgaggctccccatggggacctgcca
tcagattcagacgaggaagctgaagtgatcgttgagagtgaggaagaagttgcagaggag
gcagagggagatgaacatgtacgtcacctgaggcagaagaaggaggagctcagtaagagg
aaggaacagaagctgcgagacaaggagaacattcagaaactgatagaaaaggatcggcat
cgctgcattgagctcgagattcatcctattttcttgatcccagacaccaattgttttata
gatcacttttccagtctcaaacaactcatacagttgaagaaatatacagtggttgtacca
cttatagttatcaatgaattggatggcttagcaaaaggcagcaaggaggggcagtatgac
tcaacagaacaggcaaccaaagttagagaaagatcgaaacagacagtggaatttctggag
gaagagtttgaaaagaagaattcccatgtgaaggctctgacctccaagggaaatgtccta
gaaacaatttcatttaggagtgaggaaggggactcgagtgggggaatcaatgacgacatc
atcctatcttgttgtcttcactactgcaaggacaaagccagagaattcatgccgaaagac
aaagatgccccagtgaggttatacagggaagtagtgttgctgacagatgacagaaacctc
cgactgaaggcccacacctgtaatgtacctgtgaaggatgtcctgtccttcctcaagtgg
agcaagatcacctga
DBGET
integrated database retrieval system
