Cellulophaga algicola: Celal_4278
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Entry
Celal_4278 CDS
T01404
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cao
Cellulophaga algicola
Pathway
cao03030
DNA replication
cao03410
Base excision repair
cao03420
Nucleotide excision repair
cao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Celal_4278
03410 Base excision repair
Celal_4278
03420 Nucleotide excision repair
Celal_4278
03430 Mismatch repair
Celal_4278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cao03032
]
Celal_4278
03400 DNA repair and recombination proteins [BR:
cao03400
]
Celal_4278
Enzymes [BR:
cao01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Celal_4278
DNA replication proteins [BR:
cao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Celal_4278
DNA repair and recombination proteins [BR:
cao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Celal_4278
NER (nucleotide excision repair)
GGR (global genome repair) factors
Celal_4278
MMR (mismatch excision repair)
DNA ligase
Celal_4278
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Celal_4278
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
HHH
BRCT_2
HHH_8
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ADV51518
UniProt:
E6X4D5
LinkDB
All DBs
Position
complement(4881306..4883306)
Genome browser
AA seq
666 aa
AA seq
DB search
MESKQKIEALRIGLREHNYNYYVLDTPTISDYDFDMQLKELQDLEEKHPEFYDATSPSLR
VGGMVTKNFKTIVHDSRMYSLDNSYSKEDLEEWEKRIQRNLGDVPVAFTCELKYDGASIS
ITYENGQLVRALTRGDGFQGDDVTNNIKTIKSIPLQLKGDYPPKFDIRGEIVLPFEGFAK
MNAERIENGEDPYMNPRNTASGSLKLQDSALVAQRPLECLLYGIVGEKTGIESQFQMLEK
ARVWGFKVPTVAQLCKSTDEVMAFVEYWDIHRHELPYETDGVVIKVNSLQYQEELGYTSK
SPRWAMAYKFKAEQVATLLNEITYQVGRTGAITPVANLVPVLLAGTTVKRASLHNADQIA
KFDIREGDTVFVEKGGEIIPKIVGVDFAQRPSNSVPTKYIDHCPECNAELERAEGDAKHF
CPNFYGCPPQITGRIQHYISRKAMDIEGLGGETVALLYKEQLIKNYADLYTLTKEQVMPL
ERMAGKSAENLVNGVKASVSIPFERVLFALGIRFVGETVAKKLAKAYKNIDALKVASVEE
LVKVDEIGERIANSVVEFFQNETNQETIERLKSYGVQFELSADKLENQTEELKGQIFVVS
GVFEKVSRDELKKLIEDNGGKVGSSVSSKTTFLVAGDKMGPSKRTKAESLGVAIISEDEF
LALLAS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggagagtaaacaaaaaatagaagcactaagaataggacttcgagaacataattacaat
tattacgtattagatactccaacgatatctgattatgattttgacatgcaattgaaagaa
ttgcaagatctagaagaaaaacatcctgagttttatgatgcaacctcacctagtttacgt
gttggcggtatggttactaaaaattttaaaactatagtgcatgacagtcgcatgtattcc
ttagacaatagttattctaaagaagatctagaagaatgggaaaagcgaattcagcgtaat
ttaggagatgtacctgtagcatttacttgtgagcttaagtatgatggtgcctctataagc
atcacctatgaaaacggacagttggtgcgtgcgcttacgcgtggcgatggttttcaagga
gatgatgttactaataatataaaaacaattaaatctatcccattacaattgaaaggtgat
tatcctcccaaatttgatattcgtggagagattgttttaccttttgaaggttttgcgaaa
atgaatgcagaacgtatagaaaatggggaagacccgtatatgaatcctaggaatactgca
tcgggaagcttaaagcttcaagatagcgctttggtggcacaacgaccattagaatgcttg
ttgtatggtattgtaggagagaaaacaggaattgaatcgcagtttcaaatgctagaaaaa
gcgagggtttggggttttaaagtgccaacggtagcccaactttgcaagtcaaccgatgaa
gtgatggctttcgtagaatattgggatattcatagacatgaactgccatacgaaacagat
ggtgtggttattaaagtgaatagcttgcagtaccaagaagaattggggtacacgtctaaa
tcgccacgttgggcaatggcatataaatttaaagcagagcaggttgctacgcttttaaat
gagattacgtatcaagtagggagaacaggagctattactcccgtcgctaatttagtacct
gtactattagcaggaactacggtaaaaagagcttccctgcacaatgcagatcaaatagcg
aaatttgatattcgcgaaggagatacggtttttgttgaaaaaggaggagaaattattcca
aaaattgtgggagtagattttgcacaacgtccaagtaattctgtacccacaaaatatata
gatcattgtcctgagtgtaatgcggagttagagcgtgcggaaggagatgctaaacatttt
tgtcctaatttctatgggtgtcctccacaaattacaggaagaattcagcattatatttca
cgtaaagccatggatattgaaggtttaggtggtgaaacagtagcgcttttgtataaagag
caattgattaaaaattacgctgatttatataccttaactaaagagcaagtaatgccttta
gagcgtatggctggaaaatctgctgaaaatttggtgaatggagtaaaagcgtcagtttct
ataccttttgaacgagtgctttttgctttaggaatccggttcgttggagagaccgtagct
aaaaaattggctaaagcctataagaatatagatgctttgaaagttgcctcagtagaagaa
ttggtaaaggttgatgagatcggagagcgtatagccaatagcgtggttgaattttttcaa
aatgaaaccaatcaagaaactattgagcgtttaaaaagttatggtgttcagtttgagtta
tccgcagataaattagaaaaccagaccgaagaattaaaagggcaaatctttgttgtatca
ggtgtgtttgagaaagtgagtcgtgatgagctcaaaaaattaattgaagataatggcggg
aaagtaggctcatcagtatcttccaaaactacatttttagtagctggagataaaatgggg
cctagtaaacgaacaaaagcagaaagtttgggagttgctattattagtgaagatgagttt
ttagcattgctagcatcatga
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