Caldilinea aerophila: CLDAP_25410
Help
Entry
CLDAP_25410 CDS
T01797
Symbol
nth
Name
(GenBank) DNA glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cap
Caldilinea aerophila
Pathway
cap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLDAP_25410 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cap03400
]
CLDAP_25410 (nth)
Enzymes [BR:
cap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CLDAP_25410 (nth)
DNA repair and recombination proteins [BR:
cap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLDAP_25410 (nth)
Prokaryotic type
CLDAP_25410 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
DUF3349
Motif
Other DBs
NCBI-ProteinID:
BAM00581
UniProt:
I0I5P3
LinkDB
All DBs
Position
3168866..3169528
Genome browser
AA seq
220 aa
AA seq
DB search
MNAKNELTADAPAADRIGAILELLHAEYPDARCALDHRNPLELLVATILSAQCTDERVNK
VTPALFTKYPDARAFAEADLSELEEMIRSTGFYRNKAKNIQQACRRIVEEYDGEVPADME
KLLTLAGVARKTANVVLGVAYGIADGIVVDTHVKRLANRLGLSAHSDPDKIEKDLMAITP
REEWIDLAHLLIFHGRRVCDARKPNCGGCVIRHLCPSAQV
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgaagaacgaactcaccgccgatgcgccggcagcggatcgtatcggcgccatc
cttgagcttctgcatgctgaatatccggacgcgcgctgcgcgctcgatcaccgcaacccg
ctcgagctgctggtggcgacgatcctttccgcacagtgcacggacgagcgcgtcaacaag
gtgacgcccgcgctctttaccaaataccccgatgcgcgcgccttcgccgaggccgacctg
agcgaactagaggagatgatccgctccaccggtttttatcgcaacaaggccaaaaacatc
caacaggcgtgccggcgcattgtggaagaatacgacggcgaagtgcccgccgatatggaa
aagctgctgactctggctggcgtggcgcgcaagacggccaacgtcgtgctcggcgtcgcc
tatgggatcgcggacggcatcgttgtcgatacgcacgtcaagcggctggccaaccgtctg
gggctgagcgcccacagcgatccagacaagatcgaaaaggatttgatggcgatcacgccg
cgcgaggaatggatcgaccttgcacatcttttgatcttccatggtcgccgcgtctgcgat
gcgcgcaaacccaattgcgggggctgtgtcattcgtcatctttgcccatcggcccaggtg
taa
DBGET
integrated database retrieval system
