Capnocytophaga sp. FDAARGOS_737: FOC45_02325
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Entry
FOC45_02325 CDS
T06329
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
capf
Capnocytophaga sp. FDAARGOS_737
Pathway
capf01501
beta-Lactam resistance
capf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
capf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FOC45_02325
01503 Cationic antimicrobial peptide (CAMP) resistance
FOC45_02325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
capf03036
]
FOC45_02325
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
capf02000
]
FOC45_02325
01504 Antimicrobial resistance genes [BR:
capf01504
]
FOC45_02325
Chromosome and associated proteins [BR:
capf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FOC45_02325
Transporters [BR:
capf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FOC45_02325
Antimicrobial resistance genes [BR:
capf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FOC45_02325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CusB
Beta-barrel_RND
BSH_RND
Biotin_lipoyl
BSH_CzcB
BSH_YknX
RND-MFP_C
YknX_C
Beta-barrel_RND_2
HH_MFP_RND
BSH_YhbJ
PTS_EIIA_1
BSH_ALG44
DACZ_N
HGTP_anticodon2
HH_EMRA
PS_Dcarbxylase
HH_CzcB
HH_AprE
Motif
Other DBs
NCBI-ProteinID:
QGS17159
LinkDB
All DBs
Position
complement(539006..540127)
Genome browser
AA seq
373 aa
AA seq
DB search
MNKIFLTAVSAIAIVACNNTQQQDAQASAQIPSYPAIIVGEQNTTSFLSYPVNIEGVVNS
PVQAKVSGYITKVLVDEGQAVTQGQALFQLETQTLNQSAASAKAQVEVAQVEVNKLIPLV
EKNIVSKVQLETAKANLQRAQAAYNEVASNIGFAVVKAPVNGIVGAINYREGALVNANST
VLTTVSDVKEVYAYFSMNEKEYLDFLSNTEGKNLPEKLKNLPEASLVLANGKEYTQKGKI
QAVTGQIDPTTGSIQFRATFPNPNGLLTNGNSGTIRVPQHFSNSLVIPEVATFELQGKVF
AYKIIEKDSVVQTVITLKNRADNYAVVESGLSKGDIILVQGLNAVRRGIHVKPEPIVPMD
SIVKRIQPIFNEH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatctttttaacagcagtgtcagctatcgctatagtagcctgcaataacacg
caacaacaagatgcacaagctagtgcgcaaatcccctcatatcctgcgataatagtaggc
gaacaaaatacaacctctttcctttcttaccctgtaaacatcgaaggggtggtaaacagc
cctgtacaagccaaagtgtctggctacatcaccaaagtattggtcgatgagggacaagcc
gttacccaagggcaagcgctttttcagctcgaaacacaaaccctcaaccaatcggcagct
tcagccaaagcacaggtcgaggtggcacaggtcgaagtgaataaactcattcctttggta
gagaaaaatatagtgagcaaagtgcagctcgaaacggctaaagccaacctacagcgcgcc
caagctgcttataacgaggtggcaagcaacatcggctttgcggtggtaaaagcccctgtt
aacggcatagtaggcgctatcaactatcgtgaaggagcgttggtaaatgctaatagcact
gttctaactactgtatccgacgtaaaagaggtatatgcctacttctctatgaacgaaaaa
gaataccttgacttcttaagtaatactgagggcaaaaacctacccgaaaagctcaaaaac
ctacccgaagcctctttagtattggctaacggaaaagaatatacccaaaagggtaaaata
caagccgtaacagggcagatagaccctactaccggcagcatacagttccgcgctactttc
cctaatcccaatgggttgcttaccaatggcaacagcggtactatccgagtgcctcaacat
tttagtaactccctcgtaatacccgaagttgctaccttcgagctacaaggcaaagtattc
gcttacaaaataatagaaaaggactcggtggtacagaccgttatcactcttaagaaccgc
gccgataattatgcagtagtagaaagcggtctctctaaaggtgatatcatcctcgtacaa
gggcttaacgctgttcgcagaggtattcacgtaaaaccagagcctattgtaccaatggac
agcattgtaaaaagaatacaacctattttcaacgagcactaa
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