Capnocytophaga sp. H4358: CGC49_08720
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Entry
CGC49_08720 CDS
T05519
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
caph
Capnocytophaga sp. H4358
Pathway
caph00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CGC49_08720
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
caph01007
]
CGC49_08720
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caph03016
]
CGC49_08720
Enzymes [BR:
caph01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
CGC49_08720
Amino acid related enzymes [BR:
caph01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CGC49_08720
Transfer RNA biogenesis [BR:
caph03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CGC49_08720
Prokaryotic type
Other AARSs
CGC49_08720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1f
tRNA-synt_1e
DUF2483
Motif
Other DBs
NCBI-ProteinID:
ATA73350
UniProt:
A0AAD0E6J7
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All DBs
Position
2071288..2074800
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AA seq
1170 aa
AA seq
DB search
MKFTEHKNLDLSVVAKEILTYWQENNIFEKSIETREGKEPFVFFEGPPSANGLPGIHHVM
ARTIKDIFCRYKTQKGFQVKRKAGWDTHGLPVELGVEKELGITKEDIGKKISVEDYNKAC
KEAVMRYTNIWNDLTEKMGYWVDMENPYITYKSKYMESVWWLLKQIYNKGLLYKGYTIQP
YSPKAGTGLSSHELNQPGTYRDVSDTTIVAQFRVKKLSNKLREKLSNPFDSCDIAGASCG
GALHWADYDEADYSKLPISILAWTTTPWTLPSNTALAVGKDIDYVLIKTFNQYTFEPINI
VLAKVLVSKQFGKKFFETSEQEDFKTPPSGAGGNIPYQILAEFKGSDLEGTTYEQLIPWF
SPAENADQAFRVITGDFVTTEDGTGIVHIAPTFGADDARVAKENGIPPMLIKDENDNLVP
LVDLQGKFVKGENVPEIFSGKYIKNEYYDESPSLSERDGERIPEKSWDVELAILLKTENK
AFKVEKYVHSYPHCWRTDKPVLYYPLDSWFIKITDVKDRLFDLNKNINWKPKATGEGRFG
NWLQNANDWNLSRSRYWGIPLPIWRTEDKKEEIIIGSVEELKAEIQKSIAAGLMKEDIFA
DFQVGNMSDENYEKIDLHKNVVDEIILVSASGKPMKRESDLIDVWFDSGAMPYAQWHYPF
ENKEMVENTWKTADFIAEGVDQTRGWFYTLHAIAGLVFDGISYKNVVSNGLVLDKNGQKM
SKRLGNAIDPFTTLEEYGADATRWYMISNANPWDNLKFDLEGVAEVRRKFFGTLYNTYSF
FALYANIDGFTYKEEEIPLEKRPEIDRWILSELHTLIQKVDEAFADYEPTRATRLISDFV
QENLSNWYVRLCRRRFWKGEYEEDKISAYQTLYTCLLNVAKLMAPVAPFYAEVLYRDLVS
GTQKETAESVHLTIFPTTDKSFIDRSLESKMENAQNISSLVLSLRKKEMIKVRQPLQKIM
IPVSNEAEKREIEAVADLIKSEVNVKEIELLEDASGTLVKQIKPNFKTLGPRFGKDMKLV
VAQIQNFTQEDVQNIEKNREIIIKLAEKDVTLSIEDVEITTQDIEGWLVASSGNLLVALD
IHITDELRKEGIARELVNRIQNIRKDSGFDVTDKINICIQKQKAVEEAVSDNLEYIKSET
LTSELTFAENVSGEPIEFDDIVTKILVEKV
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcacagagcacaaaaacttagatttatcagtcgttgccaaagagatacttaca
tattggcaagaaaataatatttttgaaaaaagtattgaaacgcgtgagggcaaagagccg
tttgtattttttgaaggtccgccttcggcaaatgggcttccgggcattcatcacgtaatg
gcacgtacgattaaggatattttttgtcgttataaaactcaaaaaggatttcaagtaaaa
cgaaaagcaggttgggatacgcacggacttcctgtggagcttggcgtggaaaaagaattg
ggcattaccaaagaagacatcggaaagaaaatttcggtggaagactacaacaaggcttgt
aaagaagccgtaatgcgttacaccaacatttggaacgaccttaccgaaaaaatgggatat
tgggtggatatggaaaatccgtatattacctacaaatccaaatatatggagtcggtttgg
tggcttttgaaacagatttataacaaaggattgctatataaaggctacaccattcagccg
tattcgccaaaggcaggaacaggactttcttcccacgaactcaaccaacccggaacgtat
cgtgatgtttccgatactacgattgtggctcaattccgtgtgaaaaagttaagtaacaaa
ctcagagaaaaattatccaatccttttgatagttgtgatattgcaggggcttcttgcggt
ggtgctttgcattgggcggattatgatgaggcagattatagtaaacttccaatttctatc
ctcgcttggacgaccacaccttggacgcttccatcaaataccgctttggctgttggtaaa
gatattgattatgtgctgattaaaactttcaatcaatatacgtttgagccaatcaatatt
gttttggcaaaagtgttggtttcaaaacaattcggaaagaaattttttgagacttcagaa
caagaagattttaaaactcccccttcgggggcaggggggaatattccttaccaaatcctt
gccgaattcaaaggttctgatttagaagggactacctatgagcaactcattccgtggttt
agtcctgcggaaaatgccgaccaagccttccgagtaattacaggcgatttcgtaactacg
gaagacggaacagggattgtacatatcgctccgacttttggtgccgatgatgctcgcgtt
gccaaagaaaatggcattccgccgatgcttatcaaagatgaaaacgacaatcttgtgcca
cttgtggatttgcaaggaaagtttgttaaaggcgaaaatgttcctgaaatttttagcgga
aaatacatcaaaaacgaatattacgatgagtctccctctctttcggagagggacggggag
aggataccagaaaaatcgtgggacgtagagttggcaattctgttaaaaactgaaaataaa
gcttttaaggtggaaaaatacgtccactcatatccgcattgttggcgaactgacaaaccc
gttttgtactatccgctcgattcttggttcatcaaaattacggacgtgaaagaccgcctt
ttcgacttaaataaaaatatcaattggaaacccaaagccaccggtgaaggacgtttcgga
aattggttacaaaacgccaacgattggaatttgtcgcgttcgcgttattggggaattccg
cttccgatttggcgaaccgaagacaaaaaagaagaaattatcattggttctgttgaagag
ttaaaggctgaaattcagaagtctattgctgcaggattgatgaaagaagatatttttgct
gattttcaggtaggaaatatgtctgacgagaattacgagaaaatcgacctacataaaaac
gtagtagatgaaatcattttggtttcagcatcgggcaaaccgatgaaacgcgaaagcgat
ttgattgacgtttggttcgattcgggagcgatgccttacgcacaatggcactatccgttc
gaaaacaaagaaatggttgaaaacacttggaaaacagccgatttcatcgccgaaggagtt
gaccaaacacgcgggtggttctatacacttcacgcgattgcaggattagttttcgatggg
atttcatacaaaaatgtagtttccaacggattagttttggataaaaacggacaaaaaatg
tctaaacgtttgggcaatgccatcgatccgttcaccactttggaagaatatggagccgat
gccacacgttggtatatgatttccaatgccaatccgtgggataacttaaagtttgatttg
gagggagttgccgaagtgcgtcgtaagttttttggaacgctttacaatacctattcattc
tttgctttatatgctaatattgacggatttacatacaaagaagaggaaattcccttagaa
aaacgccctgaaatcgaccgttggattttgtcggaacttcatacccttatccaaaaagta
gatgaagcttttgccgactatgagcctactcgtgctacgcgtttaatttcggattttgta
caagagaatttaagtaactggtatgtgcgtttgtgccgcagacgtttctggaagggtgaa
tatgaggaagataagatttcggcttatcagactttgtacacttgtcttctgaacgtggca
aaactaatggctccggtagctccgttctacgcagaggtattgtacagagatttggtgtca
ggaacccaaaaggaaacggcagaaagtgtgcatttaaccattttccctacaacagataaa
tcgtttattgataggtcgttggagagcaaaatggaaaacgctcaaaacatttcatctttg
gtgctttcacttcgtaaaaaggaaatgataaaggtgcgtcagccgctacaaaaaattatg
attcctgtatcaaatgaagctgaaaaaagggaaattgaagcagttgccgatttgataaaa
tcggaagtaaacgttaaagaaattgaacttttagaagatgcttcgggtactttagtgaag
caaattaaaccgaatttcaaaactttgggacctcgtttcgggaaagatatgaaattggta
gttgctcaaatacagaattttacgcaagaagatgttcagaatattgaaaaaaatcgtgaa
attattataaaattagccgaaaaagatgtaactttaagcattgaagatgtagaaattacc
acgcaagacatcgaggggtggcttgtggcaagttcagggaatttgttggtagccttggat
attcatatcacggacgagttgagaaaagagggaatcgctcgtgagttagtgaatcgtatt
caaaatatccgaaaagatagcggttttgatgttacggataaaatcaatatttgcattcaa
aaacaaaaagcggtggaagaagctgtttcagacaatttggagtacatcaaaagtgaaact
cttactagtgaacttacgtttgctgaaaacgtttcaggtgaacctatcgagtttgatgat
attgtaacgaagattttggtggagaaagtgtag
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