KEGG   Coffea arabica (coffee): 113688679
Entry
113688679         CDS       T11342                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
carb  Coffea arabica (coffee)
Pathway
carb03083  Polycomb repressive complex
carb04120  Ubiquitin mediated proteolysis
carb04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113688679
   04120 Ubiquitin mediated proteolysis
    113688679
  09126 Chromosome
   03083 Polycomb repressive complex
    113688679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:carb04131]
    113688679
   04121 Ubiquitin system [BR:carb04121]
    113688679
   03036 Chromosome and associated proteins [BR:carb03036]
    113688679
Membrane trafficking [BR:carb04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    113688679
Ubiquitin system [BR:carb04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     113688679
   Cul7 complex
     113688679
Chromosome and associated proteins [BR:carb03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     113688679
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     113688679
SSDB
Motif
Pfam: Skp1_POZ Skp1 BTB
Other DBs
NCBI-GeneID: 113688679
NCBI-ProteinID: XP_027062345
UniProt: A0A6P6S853
LinkDB
Position
1e:complement(1199778..1200764)
AA seq 221 aa
MLYAIFGVQTFLQRDLELRNLSLFNRRKGFSYLFQKSLLFPFSISFFLSQGFIYLFLLSS
RKSSSPAAIMSSSSPKMITLQSSDGETFEVEEAVAMESRTIKHMIEDDCANSSIPIPNVT
SNTLTKVIEYCKKHVEAKSDEEGLKSFDAEFMKIDKDTLYDLLMASNYLDIKSLLDLGCQ
TVADKIKGKNPEEIRKEFGIKNDFTPEEEEEIRKESPWVFD
NT seq 666 nt   +upstreamnt  +downstreamnt
atgttatacgctattttcggtgtccaaacctttctccagagagatttggaacttaggaat
ctgagtctatttaatagaaggaagggcttctcttaccttttccagaaatcattactgttt
cctttctcaatctctttttttctgtctcaaggctttatttatttatttttattgagtagc
agaaaatcatcaagtccagcagcgatcatgtcttcatcatcgccaaagatgatcacgttg
cagagttcagacggagaaaccttcgaggtggaggaagccgtggccatggaatcgcggacg
atcaagcacatgatcgaggacgattgcgcgaacagcagcatccctatcccaaacgttacc
agcaataccttaactaaggttatcgagtactgcaagaaacatgtcgaggcaaagagcgac
gaagaagggctcaaatcttttgatgctgaattcatgaagatcgacaaagataccctctac
gatcttctcatggcctctaattatctcgacatcaagtctctgcttgatctcggttgtcaa
actgtggcagacaagatcaagggtaagaatcctgaagagatccgtaaggagttcgggatc
aagaatgatttcacccctgaggaagaagaggagattcgcaaggagagtccctgggttttt
gactga

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