Coffea arabica (coffee): 113690999
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Entry
113690999 CDS
T11342
Name
(RefSeq) probable pectate lyase 22
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113690999
Enzymes [BR:
carb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
113690999
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF1803
Motif
Other DBs
NCBI-GeneID:
113690999
NCBI-ProteinID:
XP_027064967
UniProt:
A0A6P6SDR0
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Position
5c:complement(48241253..48243165)
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AA seq
400 aa
AA seq
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MSIFSLFPLLISVYACMTSSARPFMPMSDATGWRPTKNSTTQPGTESCRTGNPIDDCWRC
DPDWETNRKVLADCAIGFGRNAVGGRDGDFYVVTTEADDPKNPSPGMLRHAVIQDEPLWI
IFDHDMDINLDEELLMNSYKTVDGRGHNVQISNGPCITIQNVTNIIIHGIYIHDCVQAGN
AVIADGPNHYELRGISDGDGISIFAARDIWIDHCTLSSCHDGLIDAVFESTAITISNNYM
FKHNEVMLLGHNDNFTADENMQVTIAFNYFGEGLIQRMPRCRHGYFHIVNNVYTGWEMYA
IGGSANPTINSQGNVFIASNDDETKEVTKRESPLGYEDWKNWNWRSEEDLMLNGARFTAS
GQEAPDSYTKASSMVARPASILTNIVPFSGVLNCKIGQQC
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattttcagtctttttccccttctcatttcggtttatgcctgtatgacatcttca
gcacgtccctttatgccaatgtctgatgcaacaggatggcggccaacaaagaactcaact
actcaaccaggaacagaatcatgtagaacaggcaaccccattgacgattgctggagatgt
gaccctgattgggaaaccaaccgaaaagtgctagctgattgtgccattggattcgggcgc
aatgctgttggaggccgagatggcgacttttatgttgtcacaactgaagcggatgatccc
aaaaatcctagccctggcatgctccgccatgctgtcatccaagatgagcctctatggatt
atatttgaccatgatatggacattaaccttgacgaagaactcctgatgaactcttataag
accgtagatggtcgaggacataatgtgcagatatctaatggtccatgcatcactatacaa
aatgtcacgaatatcattatccatggcatttatatacatgattgtgtgcaagctggaaat
gctgtgattgcagatggaccgaatcattatgagttgaggggtatttcagatggggatgga
atatcaatatttgctgctagagacatttggatcgaccattgtacgctgtctagctgccat
gatggacttattgatgcagtgtttgaatcaaccgcgataaccatttctaacaactacatg
tttaagcataacgaagtcatgctcttgggtcacaatgacaatttcaccgctgacgagaac
atgcaagttaccattgccttcaattactttggagaaggtcttattcagagaatgcccagg
tgtaggcatggttattttcacattgtcaacaatgtatacactggttgggagatgtatgca
ataggaggaagtgccaatccaacaatcaacagccaaggcaatgtcttcattgcctcaaat
gatgatgaaacaaaggaggttacaaaacgggagagcccattgggatatgaggactggaaa
aattggaattggagatcagaggaagatcttatgctcaacggggctagatttactgcttca
gggcaagaagctccggatagctacaccaaagcatctagcatggttgcaaggccagcttca
attctcacaaatattgtaccgttttcaggagttctaaactgcaagattggccaacaatgc
taa
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