Coffea arabica (coffee): 113695605
Help
Entry
113695605 CDS
T11342
Name
(RefSeq) protein SIEL-like
KO
K13141
integrator complex subunit 4
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113695605
Spliceosome [BR:
carb03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
113695605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
INTS4_C
PDS5
HEAT_GCN1_C
Cnd1
Adaptin_N
TPR_DNAAF5
HEAT_MROH2B_C
HEAT_EZ
Hisat_C
Motif
Other DBs
NCBI-GeneID:
113695605
NCBI-ProteinID:
XP_071910294
UniProt:
A0ABM4USP6
LinkDB
All DBs
Position
6e:complement(676473..682415)
Genome browser
AA seq
943 aa
AA seq
DB search
MVMEQRLLADAQFLLLGSQRHPRLLSSPHAALQPLLPLITSPGASLPTLSSLLKTLTLQL
QCTTTTHLPRIVLSLLSALSDHHPDLRREISLAVRAFALRLLPFSPSSSFAHSLAILFKD
ADTSSDVTDEPTFLSICFRPCKASLRRWLLQNVDKFCVRPSVLIAVLLGFTKDPYPLTRK
AALDGLVWLSDKFVAVEDQSLLQCCYFSAAELLFDAEDSVRCSAVRTVSEWGLLLVESNQ
DKCKIDWSDALFVQLCSMVRDMSMKVRTEAFDALAKVPMVSQNVLLLTLTKKATSATKEI
TFPGRYAAKIYKLPASAAAFAFIHGLEDEFFEVRRSACCALRTFAIAYGDFACEAVNLLM
DMLNDDSVVVRLLALETMHHMAMYDCLKVQEGHLHMLLGALVDDSTLIRSAAMKILQLIR
LHKLAMFKLCFEGLVRNLELYPQDEADLLSVLLNIGQNHGWFVAHLIQENTEKIEPSLGG
RLGFESARIVALLVLAISAPVSIERGICSIPPRMYSYAVTLLGRISDGLIGTLNQNDLLS
HLSRCSRFSCVSSSEFFRGEESAVPLVKSDTSLYPKNDGIHGSCSQRLLELERVVHPIAN
YPLKIHDEMESSMGNILQKIHSLWPLIRCGFADEATRTLRSWKKQLKTFTCDSSEPTAEL
VFVLQYLRTIKLLGRVWIRCMFPLKPCFGVRKLEVLFRKLERSLKEMKYRFLGFSSEQEL
HILELILVTLILKLSNVKACCPSTNLKEISSVVTRVEHLVGGRSVELSSFVIELQKILRE
IGPSTAVLENALLLQKSLEYYTLRQFMFSGILVHVAAKLDVYNNYENPLHYVLGLPAGIP
IEITLRNISRESRIWLKMTFKEKLAQFVYLDLHGLSGGDECRKFTFVAPFFGPPKARSFL
LKISIGMECSSEPPYRSNVCGGPKHELINISGDSEVFLTRVGG
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagcagcgtctcctggccgacgcccaattcctactgctgggcagccaaagg
catccccgccttctatcctctccccatgccgccttgcagccactgctgcctctcattaca
agccccggcgcctccctccccaccctatcctctctcctcaaaaccctaactcttcagctc
cagtgcaccaccaccacccacctcccccgaatcgtactctccctcctatctgccctctct
gaccaccatcccgacctccgccgcgaaatttccctcgctgtccgtgcattcgccctccgc
ctccttcctttctctccatcttcctccttcgctcattccctcgccatcctctttaaggat
gctgacacttccagtgatgtcaccgacgaaccgacgttcctttccatttgctttcgcccg
tgtaaagcttccttaaggcgctggctgcttcagaatgtggataaattttgcgtcaggccg
tcggtgttgatcgcggtccttttagggttcaccaaggatccgtatccgttaaccaggaaa
gccgccctggatggtttggtttggctctccgataagttcgttgcggtggaggatcagagc
ctgcttcagtgttgctatttttccgccgctgagcttctctttgatgcagaggattccgtc
agatgctctgcagttcgcactgttagcgagtggggactgttacttgtggagtccaaccaa
gacaagtgtaaaattgattggtctgatgctttgtttgttcagctttgctcaatggtgagg
gacatgagcatgaaggtcagaactgaagcttttgatgccctcgcaaaggttccaatggtt
tcgcagaatgttttattgctgacattaactaagaaagctacatccgccacaaaagaaata
acttttccaggccgttacgctgcaaaaatatacaaattgccagcatcagccgcagctttt
gcttttattcatggcctggaggatgaattctttgaggtaagaagatctgcgtgctgtgcc
ttgcgtacattcgccattgcttatggtgattttgcatgcgaggctgtaaatctcttgatg
gatatgcttaatgatgattcagtggttgtgcgtttactagctctggagacgatgcatcat
atggccatgtatgactgcctaaaagttcaagaaggacacttgcatatgttgctaggggct
ctagtggatgactctaccttgataagatccgcagcaatgaaaattcttcaattaatcaga
ttgcacaaattggcaatgtttaagttatgttttgaaggccttgtgagaaacttggaattg
tatccacaggatgaagctgatttgctttctgttttgctcaatattgggcaaaatcatggg
tggtttgtcgcccaccttatccaggaaaatacagaaaagatagaaccttctcttggaggg
agattgggatttgagagcgcaagaattgttgccttgttggtgctggccatctctgcccca
gtctcaattgaacgaggcatatgcagtattccaccgaggatgtactcttatgcagttact
ttactggggagaatttctgatggtttgattggtactttgaaccagaatgaccttctgtct
catctttcgcgttgcagccgattctcatgtgtttccagttctgagtttttcagaggagaa
gagtcagctgtccctctggtgaaaagtgatacgtccttgtatccaaaaaatgatgggatt
catggaagttgttctcagagattactggaattagagagagtagtgcatccaattgctaat
taccctctaaaaatacatgatgaaatggaaagttctatgggcaatatccttcaaaagatt
cacagcctttggccattaatacgctgtggatttgcagatgaagcaactagaactttaagg
agttggaagaaacagttgaagacatttacttgtgattcatccgaacccacagccgagtta
gtttttgttttgcaatatctgcgcacgataaaactgcttggaagggtatggatccgctgt
atgtttcctttgaagccctgctttggggtgaggaaattggaagtcttatttagaaagttg
gaaaggagcctgaaagagatgaagtataggttcctaggttttagcagcgagcaggagttg
catattttagagctaattcttgttacacttatattgaagttgtccaatgtcaaagcctgc
tgtccaagtactaatttaaaggaaataagttctgtagttactcgtgttgaacatcttgtt
ggaggcagatcagttgaactctccagctttgtgatagagcttcagaagatactgagggaa
attggtccctcaacggctgtccttgaaaatgcacttctgctccaaaagtcacttgagtac
tacactttgaggcagtttatgttttctggaatactcgtacatgtggcagctaaactggat
gtgtacaacaactatgaaaatcctctccattacgttttaggtctccctgccggcatacca
attgaaattactttgcgtaacatctcaagggaaagtcgcatatggctgaagatgactttt
aaagagaagctagctcagtttgtttacctggatttgcatggactaagcgggggtgatgaa
tgtcgaaaatttacatttgttgcacccttttttggaccccctaaagcgaggtccttctta
ctgaagattagcattggaatggaatgctcatctgagcctccttaccggtcgaatgtttgt
gggggaccgaaacacgagcttattaatatttccggagatagtgaagtgtttctgactagg
gttggtggatag
DBGET
integrated database retrieval system
