Coffea arabica (coffee): 113699303
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Entry
113699303 CDS
T11342
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X2
KO
K11644
paired amphipathic helix protein Sin3a
Organism
carb
Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113699303
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
113699303
REST complex
113699303
Heterochromatin formation proteins
Other heterochromatin formation proteins
113699303
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
113699303
NCBI-ProteinID:
XP_027075364
UniProt:
A0A6P6TAC8
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All DBs
Position
7c:complement(1407106..1417117)
Genome browser
AA seq
1372 aa
AA seq
DB search
MKRLRDDAFVNPQFKRPFGSSRGESYGQPQVPGGSGGGGGSGSGGGGGGGGGGTSQKLTT
NDALTYLKEVKDMFQDQREKYDMFLDVMKDFKAQRIDTAGVIARVKELFKGHPNLILGFN
TFLPKGYEITLNDEEEAPPKRTVEFEEAISFVNKIKKRFQSDDHVYKSFLDILNMYRKEH
KGINEVYQEVAALFEDHPDLLDEFTRFLPDSSAAASAPHTSFGRHSFHRYDERSSAVATL
RQSQMEKQRFRRDRIVSPHGERDLSVERPDTDDDKTMVRLHKEQKKRAERENRERRNRDQ
DYREPDNENNGDISMHRLTEKRKSARKVEDFGGNTVSASYDDKDSLKTMYSQEFSFCEKV
KERLRNPDDYQAFLKCLHIYSTEIITRKELQSLVADLLGKYPDLMEGFNEFLERCEKIDG
FLGVMSKKSLWNEGHGSKTLKLEERDKEHKRDMDMGKEKDRYKEKYWGKSIQELDLSNCQ
RCTPSYRLLPEDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRC
EDDRFELDMLLESVSSTAKRAEELLNGINDNSIGADSPIRIEDYFTALNLRCIERLYGDH
GLDVMDILRKNPSLALPVILTRLKQKQEEWTKCRSDFNKVWAEIYAKNHYKSLDHRSFYF
KQQDSKNLSTKSLVAEIKEVKEKKQKEDDVLLSIAAGSRHPIVPNLEFEYTDTEIHEDLY
KLIKYSCEEVCSTKEQLSKVMRLWTSFLEVMLGVPSRPNASEVTEDDVLSKRRATKGTGT
SVVESDGSPSADATTMNSKQSKPTCNGDADTSPARINSGRTSFTNADTMAKEDGLTVASD
ERLTSSDAAVATGADVAHGRINLEITSGRGATSSRPINGGGVEDSHGAKSNVGDILSSEG
GDASRLLALANGGFAEGSRHNSFNKDSVDPSKNEKEEGELSPNGDFEEDNFVAYRESSSQ
VIPNANHGDENMQYPNGVGEEISCQDAAGENDADADDEDSENVSEAGEDVSGSESAADEC
SREENEEEEDGEHDEIDGKGESEGEAEGVGEAHFVGGDGASMPMSERFLLNSKPLTKHVP
SALSDTGKANSRIFYGNDTFYVLFRLHQVLYERLLSAKQNSTSSELKWRNSKDTDTDPYA
RFMSALYSLLDGSADNAKFEDDCRSIIGNQSYVLFTLDKLMYKLVKQLQTVSSDELDNKL
LQLYEYEKSRKPEKFVDSVYYENSHVLLYEENIYRFECTSSPTRLSIQLMDDGNEKSEVV
AVSIDPNFAAYLYNDYLSVGQGKKESSAVMLKRNKRKFAEIDEDSAFCKAMETVRVWNGL
ECKMSSNSSKISYVLDTEDFFFRLGRKRRNVSGSKSDEPRVKRFNQFLAASL
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcttaagggacgacgcttttgtgaaccctcaatttaagcggccatttggttcc
tctcggggagaatcctatgggcagccgcaagttcctggaggcagtggaggaggaggtggc
agcggcagcggtggaggtggaggtggaggtggaggtggtacttcacaaaagctcaccaca
aatgatgccttaacctatttgaaggaagttaaggatatgtttcaagatcagagagagaag
tatgacatgttccttgatgtgatgaaagattttaaggctcaaagaattgacacagctggt
gttatagcaagggttaaagagctatttaaaggacatcccaacttgatacttggtttcaat
accttcttgccaaagggttatgaaattactttgaatgatgaagaagaggccccaccaaag
agaacagttgaatttgaagaggctataagctttgttaacaagataaagaaacgttttcaa
agtgacgatcatgtctataaatcttttctagacatcttgaatatgtatcggaaagaacac
aagggcattaatgaggtctaccaggaggtggcagcactttttgaagaccacccagatttg
ctggatgagttcactagatttttgcctgattcttcggctgctgcatcagcacctcatact
tcttttggccgacattcttttcatcgctatgatgagaggagctctgctgtggctactttg
cgacaatcacagatggaaaagcaacgtttccgtcgggatagaattgttagtccccatggt
gaacgcgatcttagtgtagagcgtcctgataccgatgatgacaaaactatggtgagattg
cataaggagcagaagaagcgtgctgaaagggagaacagggaaaggagaaaccgtgatcag
gattacagggaacctgataatgaaaataatggggacataagcatgcatcgtcttactgaa
aaaagaaaatctgctcggaaggttgaagattttggcggcaatacagtttcagcctcttat
gatgataaagactccctaaagaccatgtatagccaagaattctctttctgtgaaaaagtt
aaggagaggttacgcaaccctgatgattaccaggcatttttgaagtgtcttcacatttat
agcacagaaataattacaaggaaggagttacagagtttggttgctgatctacttggaaaa
tatcctgatcttatggaggggttcaatgaatttttggaacgctgtgaaaaaattgatgga
tttcttggtgtcatgagcaaaaaatctttgtggaatgagggacacggttcgaaaacactc
aagttggaggaaagagacaaggaacataaacgtgacatggatatgggaaaagaaaaggat
aggtacaaggagaagtattggggaaaatccattcaggaacttgacctctcaaattgtcaa
agatgcactccaagttaccggcttcttcctgaggattatccaatcccttcagcaagccag
aggtctgagcttggggcccaagttttaaacgaccattgggtatctgtgacatcgggaagt
gaggattactctttcaaacacatgcgccgaaaccagtacgaagaaagtctgttcagatgt
gaagatgatagatttgagctagatatgttgctggagtcagtcagctcaacagctaagcgt
gccgaggagttgttgaacggcatcaatgataattcaataggtgcagatagtccaatcaga
attgaagactactttacagccctcaatttaagatgcattgaacgcctttatggtgatcat
ggtttggatgtgatggacattttgcgaaaaaatccatctcttgcattgcctgttatattg
acccgcctaaagcagaagcaagaggagtggactaagtgtcgttcagattttaacaaagtt
tgggctgaaatttatgccaagaaccattacaagtcgcttgaccaccgtagcttctatttc
aagcaacaagattcaaagaacttgagcaccaaatccttggtggcggagattaaagaagtt
aaggagaaaaagcaaaaagaggatgatgtgcttctttctatcgctgctggaagtagacat
cctatagttccaaatcttgaatttgaatatactgatactgaaattcatgaagacttgtat
aaactaattaaatattcatgtgaagaggtttgctcaacaaaagaacaattaagtaaggtt
atgaggctttggacttccttccttgaggtaatgttgggtgttccttctcggcctaatgct
tcggaggttactgaagatgatgtactgtccaagcgtcgtgctaccaaaggcactgggaca
agtgtagtagaaagtgatggaagcccaagtgctgatgctactaccatgaattctaagcag
tcaaaacccacctgcaatggagatgcagacacttcacctgcacgtattaattctggcagg
actagcttcacaaatgcagatacgatggccaaagaagatggattaacagtggcttctgat
gagcggttaactagttctgatgctgcagttgctacaggagcagatgtagctcatggaaga
atcaacttggaaataacttcagggcgtggtgcaacttcttcacgacctattaatggggga
ggagttgaggatagtcatggggcaaagtcaaatgttggagatattctatcatcagagggc
ggtgatgcttcaagactgctggcattggcaaatggagggtttgcagaggggtctagacat
aacagtttcaacaaggattcggttgatccatccaaaaatgagaaagaggagggggagtta
tcacctaatggtgattttgaagaggataattttgttgcatatcgggaaagtagctcacaa
gtcattcctaatgctaatcatggtgacgaaaacatgcaatatccaaatggagtgggcgag
gagatctcttgtcaggatgctgctggtgaaaatgatgcagatgctgatgatgaagacagt
gaaaatgtttctgaagctggtgaagatgtttctggcagtgagtctgcagctgatgaatgc
tcacgtgaagagaacgaggaagaggaagatggagaacatgatgagattgatggcaaaggt
gagagtgaaggtgaggcagaaggtgtgggtgaagcacactttgttggtggagatggtgca
tcaatgccaatgtctgagcgctttcttcttaactctaagcctctcacaaagcatgtgccc
tcagcattaagtgatactggaaaggcgaattcacggatcttttatggaaatgatactttc
tacgtgctttttcggcttcatcaagtactgtatgaaagattattatcagctaagcagaac
tctacatcatctgaactgaaatggagaaattcaaaggatactgatactgatccgtatgcc
agatttatgagtgcgttatatagtttgcttgatggatctgctgacaatgctaagtttgag
gatgattgccggtcaataattgggaaccaatcatatgtgttatttaccttggacaagtta
atgtataagttggtcaagcagcttcagactgtttcaagtgatgaattggacaacaagctg
cttcagctgtatgagtatgaaaagtctcggaaaccagaaaaatttgttgattcagtgtat
tatgagaattcgcatgtccttttgtatgaggagaatatttatcggtttgaatgtacatct
tctccaacccgtttgtccatccaactgatggatgatggaaatgagaagtctgaggtggtt
gccgtttccatagatccaaattttgcagcctatctgtacaatgattatctgtcagttggc
cagggaaaaaaggagtcatctgctgttatgctcaagaggaataagcgtaaatttgctgag
attgatgaggactctgctttttgcaaggccatggaaactgtccgagtgtggaatggcttg
gagtgtaagatgtcttccaactcgtcaaagatctcatatgttctcgacacagaggatttc
tttttccgattgggaaggaaaagaagaaacgtatctgggagcaaatcagatgagccaaga
gtaaaacgtttcaaccaatttttggcggcatcgttgtaa
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