Coffea arabica (coffee): 113706747
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Entry
113706747 CDS
T11342
Name
(RefSeq) probable E3 ubiquitin-protein ligase RZFP34
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Pathway
carb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113706747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113706747
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113706747
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113706747
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-RING_4
Prok-RING_4
DUF8149
Motif
Other DBs
NCBI-GeneID:
113706747
NCBI-ProteinID:
XP_027084512
UniProt:
A0A6P6U374
LinkDB
All DBs
Position
8c
Genome browser
AA seq
314 aa
AA seq
DB search
MAETAFDQCGAVLIEPKDSITITEETRTETNHVHPQQSNDECTANEEFTCQDMISGTDTL
DKGYMEHGCSHYRGRCRIRAPCCNEVFDCRHCHNEAKNDLKVDQKLRHDVPRHQIEKIIC
SLCGTEQEVRQVCINCGVCMARYYCGTCKLFDDDTSKRQYHCDGCGICRIGGRENYFHCH
KCRCCYSTLLKNSHPCIEGAMHHDCPVCFEYLFESRNDITVLPCGHTIHKNCLEEMQEHL
QYACPLCSKSVCDMSKVWEKFDLEIAATPMPEPYQNMKVWILCNDCGTSAEVQFHIVAQK
CPSCKSYNTRQTRG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacagcttttgatcaatgtggggctgtgctgattgagccaaaagactcaata
acaataactgaagaaacaaggactgagactaatcacgttcaccctcagcaatccaatgat
gaatgcactgctaatgaagaattcacttgtcaggatatgataagtggtactgacaccctg
gataaaggctacatggagcatgggtgttcacactatcgtggaaggtgtcgcattagagcc
ccttgctgcaatgaagtatttgattgtcgtcattgtcataatgaggcaaagaatgatctc
aaggttgaccaaaagctcaggcatgatgttcctcgccatcaaattgagaagattatatgc
tcactttgtggaactgaacaagaggttcgtcaagtttgtataaattgtggtgtgtgcatg
gctagatattattgcggaacttgcaagttgtttgatgatgatacatcaaagaggcagtac
cattgtgatggttgtggcatttgcagaattggtggacgggaaaattacttccattgtcat
aaatgccgatgttgctactcaacacttctgaagaatagccacccatgcatagaaggagcc
atgcaccatgattgccctgtttgctttgagtatctctttgagtcaagaaatgatataaca
gttttgccttgtgggcacacaattcacaagaactgcttggaggaaatgcaggaacacttg
cagtatgcttgcccactgtgctcgaagtcagtctgtgatatgtcaaaagtgtgggagaaa
tttgacttggagattgcagcaacccccatgcctgaaccttaccaaaatatgaaggtttgg
attctgtgcaatgattgtggaacaagtgcagaagtacaatttcacattgtagcccagaaa
tgccctagttgcaagtcttataacactcgccaaaccagaggatag
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