Coffea arabica (coffee): 113709353
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Entry
113709353 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
carb Coffea arabica (coffee)
Pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113709353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113709353
03041 Spliceosome [BR:
carb03041
]
113709353
03032 DNA replication proteins [BR:
carb03032
]
113709353
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
113709353
Spliceosome [BR:
carb03041
]
Complex A
U1 snRNP components
Sm proteins
113709353
U2 snRNP components
113709353
Complex B
U1 snRNP components
113709353
U4/U6.U5 tri-snRNP components
113709353
Complex C
U2 snRNP components
113709353
DNA replication proteins [BR:
carb03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
113709353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
113709353
NCBI-ProteinID:
XP_027087901
UniProt:
A0A6P6UCC4
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All DBs
Position
9c:complement(37843468..37846777)
Genome browser
AA seq
283 aa
AA seq
DB search
MSMSKSSKMLQYINYRMRVHIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPTKGSKTK
EEREDRRTLGLVLLRGEEVISMTVEGPPPPDESRAKAASAASAIPGPGIGRAAGRGVPSG
PLVQAQPGLAGPVRGVGGPSPGMMQPQISRPAVPQVSAPPISYPQQPPQVVRPGGQMPPP
PMPPMGRGPVPMAPPPQFRPGGPPPPGQFPPQFGQRPMVPPPPQFRPGGPPPPGPPRPGM
PGAPPPQSQPPRPGMPPPPPGGVFGPPRPGMPPPPNAPPQNQQ
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaagagctccaagatgcttcagtacatcaactaccggatgcgggtccac
atccaagacggccgtcaattggtcggaaaatttatggctttcgaccgtcacatgaacctc
gtcctcggcgactgcgaggagttccggaaattgccccctacgaaaggctccaaaactaag
gaagaacgagaggatcgccgcactctcggcctcgtcctcctcaggggcgaagaagtaatt
tccatgactgtcgaaggccctcctcctcccgacgagtctcgtgctaaagctgcctcagct
gcttcggcaattcctggcccgggtattggtcgggctgcgggccgtggtgttcccagcggg
ccgcttgttcaggcacagcccggtcttgctggcccggttagaggagttggtgggccttct
ccggggatgatgcagccgcagatttctaggccggcggttcctcaggtgtcggctcctccg
atttcgtacccgcagcagccgcctcaggtggtgaggcctggagggcaaatgccaccgcca
cctatgccacctatggggagagggccggtgcctatggcgccaccgccccagtttaggcct
gggggcccacctccgcctgggcagttcccgcctcagttcggacagaggcctatggttcct
ccaccacctcagtttaggccagggggcccacctccgcctggaccacctcgacctgggatg
cctggagctcctccacctcagtctcagcctcctcgtcccggtatgcccccgcctccacct
ggtggtgtgtttggaccacctcgtccaggaatgccgcctccacctaatgctccaccgcag
aaccagcagtag
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integrated database retrieval system