Coffea arabica (coffee): 113718844
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Entry
113718844 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00601
Glycosphingolipid biosynthesis - lacto and neolacto series
carb00603
Glycosphingolipid biosynthesis - globo and isoglobo series
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
113718844
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
113718844
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
carb01003
]
113718844
Enzymes [BR:
carb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
113718844
Glycosyltransferases [BR:
carb01003
]
Glycan extension
P blood group
113718844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
TcdA_TcdB
Caps_synth
Motif
Other DBs
NCBI-GeneID:
113718844
NCBI-ProteinID:
XP_027099565
UniProt:
A0A6P6VAD4
LinkDB
All DBs
Position
11e:complement(12919289..12920788)
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AA seq
403 aa
AA seq
DB search
MTNVSRKMSDYCKLSRLELHILSIVLFAVLVFVIVLADSLACDLLFNSVACETKGDRLGL
QILEAKQRVDGANNGSSMPPFNLTWLKNKLPDLDMLKARRITQKFDERVREVLYDDHQQC
QVQFFMIWIFPASLFGRREFSALESIFKAHPKACLIILSETLDSIQGFMLLKPLLDRGYR
VAPVTPDLLYLFKNTSAEAWFNDILSGNRNPGEVPLAQNLSNLIRLVVLYKYGGVYLDTD
FIVLRDFSRLRNVIGAQSADLNGNWTRLNNAVLVFDKNHPLLYEFMEEFQLTFDGNRWGH
NGPYLVSRVVERLATNMMLHKYNFTVLPPMAFYPVDWNRIDGLFMRTSNPKWTKAKLRQI
TGGDTYGIHLWNRQSSRTKIEEGSIVATLIADHCIICQNVSSS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgtttccagaaaaatgtcggattactgcaaattaagccgcctagaactgcat
atcctctcaattgtattgtttgcagtgctggtctttgtgattgtcttagctgatagtctt
gcctgtgatcttttgttcaattcggttgcctgtgaaactaaaggcgatcgtctagggttg
caaatactggaagccaagcaaagagtagatggtgcaaacaatggaagttctatgcccccc
ttcaatcttacttggctcaagaacaagttgccggatcttgacatgttgaaggcgagaaga
attacacagaagttcgatgaaagagttagagaagtcctatatgatgatcaccagcaatgt
caagttcagttcttcatgatttggatattccctgcatcattatttggtaggcgggagttt
tctgcattagagagtatcttcaaagcacatccaaaagcttgcttgatcatcttatcagaa
actctggattcgatccaagggtttatgctcttaaagcctttgctggatcgtggctataga
gttgctcctgtgacacctgacctgttgtatctattcaagaacacatctgcagaagcctgg
ttcaatgatattctgagtggaaacaggaatccaggtgaagttccattggcccaaaatcta
tctaatttgatcaggctagtagtcctctacaagtacggaggtgtttatctggatacagat
tttatagttttgagagatttttcaaggttaaggaatgtaattggagctcaaagcgcggat
ttgaatggaaattggacaagacttaacaatgcagtgctggtttttgacaagaatcatcca
cttctgtacgagttcatggaggaattccaattgacatttgatggaaacagatggggacac
aatggaccatacctggtttcaagagtggtggagaggctggcaaccaatatgatgctgcat
aagtacaactttactgtcttgcctcctatggccttctacccggtggactggaatcggata
gatgggctattcatgcgaacaagtaatccgaaatggacaaaggccaagctccgccagatt
actggtggtgacacttatgggattcacctgtggaataggcaaagtagcagaactaaaatt
gaagagggaagtattgtagccacattaatcgctgatcattgcatcatatgccagaatgtc
tctagttcttga
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