KEGG   Coffea arabica (coffee): 113725516
Entry
113725516         CDS       T11342                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
carb  Coffea arabica (coffee)
Pathway
carb03083  Polycomb repressive complex
carb04120  Ubiquitin mediated proteolysis
carb04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113725516
   04120 Ubiquitin mediated proteolysis
    113725516
  09126 Chromosome
   03083 Polycomb repressive complex
    113725516
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:carb04131]
    113725516
   04121 Ubiquitin system [BR:carb04121]
    113725516
   03036 Chromosome and associated proteins [BR:carb03036]
    113725516
Membrane trafficking [BR:carb04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    113725516
Ubiquitin system [BR:carb04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     113725516
   Cul7 complex
     113725516
Chromosome and associated proteins [BR:carb03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     113725516
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     113725516
SSDB
Motif
Pfam: Skp1_POZ Skp1 DUF7276
Other DBs
NCBI-GeneID: 113725516
NCBI-ProteinID: XP_027108277
UniProt: A0A6P6W268
LinkDB
Position
1c:complement(1596719..1597461)
AA seq 159 aa
MSSPPAKMIVLNSSDGETFEVEESVILQSQTIKHMIEDDCANSAIPLPNVTGTILAKVLE
YCKQHVKPNDGEESSKDEAESLKSFDAEFVKVDQKTLFDIILAANYLDIKGLLVLTCQTV
ADMMKGKTPEEIRKTFHIKNDYTPEEEEEVRRENSWAFE
NT seq 480 nt   +upstreamnt  +downstreamnt
atgtcttcaccaccagcaaagatgattgtgttgaacagttccgatggcgagactttcgag
gtggaggaatcggtgattttgcagtcacaaaccatcaagcacatgatcgaagacgactgc
gccaactcggcaattccgctccccaacgtcaccggcacaatattggctaaggtactcgag
tactgtaagcaacatgtgaagccgaacgacggcgaagaatcgtccaaggatgaggcagaa
agtctgaaatcgttcgatgccgagttcgtgaaagttgatcagaagacgctgttcgacatc
atcttggccgctaattatctcgacatcaagggcttgcttgtcctcacttgtcaaactgtg
gcggatatgatgaagggaaagactccggaagaaattcgcaagacattccacatcaagaat
gactacactcccgaggaagaagaagaggttcgcagggaaaattcctgggctttcgagtga

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