Coffea arabica (coffee): 113725979
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Entry
113725979 CDS
T11342
Name
(RefSeq) uncharacterized protein At4g19900
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00601
Glycosphingolipid biosynthesis - lacto and neolacto series
carb00603
Glycosphingolipid biosynthesis - globo and isoglobo series
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
113725979
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
113725979
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
carb01003
]
113725979
Enzymes [BR:
carb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
113725979
Glycosyltransferases [BR:
carb01003
]
Glycan extension
P blood group
113725979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Caps_synth
Motif
Other DBs
NCBI-GeneID:
113725979
NCBI-ProteinID:
XP_027105228
UniProt:
A0A6P6VQB2
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Position
2c:complement(11524987..11526850)
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AA seq
435 aa
AA seq
DB search
MGIFKLKLSQLLVSLVLIVLLAYNSLSIFSVYIPFPAKTAPLLASSSPENVAEKSRRFVS
MSSSGKVSSSVMYAVKEEIPVAEKKTLLDLNFTLLHTDQNSLDFIRNESVILHVKRRQSR
KALSKIFGQDGEMKQFSKRVKEFFKANSSNSSCKFRFFMTWISSIGNFGDREFFTIESLF
KSHPDGCLIIASDSLDSRLGMEILRPFLKKGFRVAAVSPDYNYLFKNTVAKAWIDRLTKG
NVNPGEVSFGQNLSNLLRLGLLYKFGGIYIDADMIVLKRFVNLRNAIGAQTVNLQTRNWS
RLNNAVMIFDKGHPLLYKFIEEFALTFDGNKWGHNGPYLVSRVVSRVSQRPGYNFTVLPP
AAFYPVDWSRIGSLFRAPRNETQSKWMFTKLRQIRGRSFAVHLWNKESRKLEIQQGSIIQ
HMMSDTCIFCNFTSG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggggattttcaaactgaagctatctcagcttcttgtttcccttgtcttgattgttctt
ttagcttacaatagcctcagtatcttctcagtttatatcccgtttccagccaagacagct
cccctgctagctagttcctcgccggaaaatgttgcagaaaaatcaagaaggttcgtttct
atgtcttcctcaggtaaagtgtcctcttctgtcatgtatgctgtgaaagaagaaatccct
gttgcagaaaagaagacccttttggacttgaactttaccctcctgcatacagaccaaaat
tcattggattttattaggaatgaatctgtcatacttcatgtgaaaagaaggcaaagtaga
aaggctttgagcaaaattttcgggcaggatggggaaatgaagcagttctcgaaaagagtg
aaggagttcttcaaagctaattcatcgaactcttcatgtaagtttcggttttttatgact
tggatatcttcaattggcaatttcggtgatagagaatttttcaccatagaaagtttattc
aagtcacatccggatggttgcttgataatagcgtcagattcattggattcaagactaggg
atggaaattttaaggcctttcttgaaaaagggattcagggtagctgcagtttcccctgat
tacaattatttgttcaagaatacagttgcaaaagcttggattgatcgtttaaccaaagga
aatgtcaatcccggggaggtttcatttggccaaaacctctccaatttgcttaggcttggt
ttgctgtacaagtttggtgggatctatatcgacgctgatatgatagtattgaagaggttt
gtcaacttgaggaatgcaattggagctcagactgtgaatcttcagacaagaaattggagc
aggttgaataatgcagtgatgattttcgataaagggcatccattgctttacaagtttatt
gaagaatttgcactaacttttgatggcaataaatggggtcacaatggcccttacttggtt
tcgagagttgtttcaagggtaagccaaaggcctggatataattttacggtgttgcctcct
gcggcattttatcctgttgattggagcaggattggcagcctctttagagctccaaggaat
gagactcaatcgaagtggatgtttactaaacttaggcagattcgtggccgaagttttgca
gtgcatctctggaataaggagagcagaaagcttgagattcaacaaggaagcattatccaa
cacatgatgtcggacacttgcatcttttgcaattttacttcaggttaa
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