Coffea arabica (coffee): 113734457
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Entry
113734457 CDS
T11342
Name
(RefSeq) E3 ubiquitin-protein ligase MIEL1-like
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Pathway
carb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113734457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113734457
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113734457
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113734457
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-RING_4
HUA1_small
Motif
Other DBs
NCBI-GeneID:
113734457
NCBI-ProteinID:
XP_027116813
UniProt:
A0A6P6WN02
LinkDB
All DBs
Position
1e
Genome browser
AA seq
293 aa
AA seq
DB search
MNGEEDNIPIPSLVDQPQENQEAAGDGESTDQPNREDYGKTLYGCEHYRRRCKLRTPCCN
QVFTCRHCHNEAMSVLSNPQERHELVRQDVKQVICAVCNIEQEVSGLCSNCGVKFGEYFC
HICRFYDDDTTKKQFHCHDCGICRVGGRENYFHCPKCGSCYSIELRDNHSCVENSMKNHC
PICYEFLFDSIKGTTIMKCGHTMHMDCYSEMISQSQYRCPICSKSVFNMSRTWERLDLEI
EATAMPEEYRYEVSILCNDCNNTGKALFHIFGHKCRHCNSYNTRMITTGENHQ
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgaagaggacaatattcctattcccagccttgtcgaccaacctcaagaaaac
caagaagctgccggtgacggcgagagtacagatcagcccaacagagaagattatggaaag
acgctttacggatgcgagcattatcgtagacggtgtaaacttcgaacgccatgctgtaat
caggtttttacttgccgtcactgtcacaacgaggccatgagcgttctgagcaatccccaa
gaacgccacgagcttgttcggcaagatgtgaagcaagtcatctgtgcagtatgcaatatc
gagcaagaggtctctgggctttgttcaaactgtggtgttaaatttggagagtatttctgc
cacatttgcagattctatgacgatgataccacaaagaagcagtttcactgtcatgattgt
gggatttgtagagttggtggacgggagaactacttccactgccctaagtgcggatcttgc
tattctattgagttgcgtgataatcactcatgtgtggagaactcaatgaagaatcactgt
cccatctgctatgagtttctatttgattccataaaaggcacaacaattatgaaatgtggg
catacaatgcatatggattgctattctgagatgatcagccaaagccagtataggtgtcca
atctgctcgaagtcagtattcaacatgtccagaacctgggaaagattagatctggaaatt
gaagctacagcaatgcctgaggaataccgttatgaagtctcaatcctctgtaatgattgc
aacaatactggtaaagcattgtttcacatatttggccacaagtgcaggcattgtaattca
tataatacccgcatgataacaacgggcgagaatcatcagtaa
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integrated database retrieval system
