Coffea arabica (coffee): 113736644
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Entry
113736644 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13130
gem associated protein 2
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113736644
Spliceosome [BR:
carb03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
113736644
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Paralog
GFIT
Motif
Pfam:
SIP1
Motif
Other DBs
NCBI-GeneID:
113736644
NCBI-ProteinID:
XP_027119504
UniProt:
A0A6P6WVS6
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Position
3e
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AA seq
755 aa
AA seq
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MADDCNSKPTVGLDRQDQLRQLSSSDHKDGVVQEMFDLDQTDAVLQKADSENFEVEENRD
ERDKNAFFDVVSQEAGASSNCFDSAVLEKSEERGFEGEERDDAVWGRKGELLLHDDVVKP
EAEGEEKVEIAEAATSCFDDAVLEKSEERGFEAEMRDGTVLVGNEKVVLHDVLRQEAEGE
EKVEIAGATTSCFDDAVSEKREERGSEAETRNGTVLEGKGEHCVEEAMGAYATGLNDGVC
KNQESKPVDCETDDSVLEKGEMGVSGIQEILKIDGKLNEKNCCMKIEVVDETALVGFGKE
RKAINFSENSRKNVNHKRPRRRGKSGADDNQKFVDMGLAQNCGTRKNEKGGKRVYTRTEL
GVLRFVAVDWQRKKWTEVYCGLGPAVQEEYDGLVGSDNHSQFHHQQLQQQKKKHTRVDFN
PRFRNEARSSVFALSGEEYSENAENENAYENLIDPPGLHVIEQDECLEDDSDEDYSSIQK
PAFFVTGEPDFDSGPPEDGLEYLRRVRWESAQIPKVKVAKVDRTKLNKEQTVYMPLIPDI
AKCPVHLMPLKEWEDAFLADFSELRLALSRLENMEAKVQSSSTVHEGQSSSRPFDSFLLE
NIDNMPFVEDSSQSVQCCTPETCGNPCSSVVANDNDGMDSVASPSSRSHISGVSEKCPTL
SMILRMDSVARVSMLRKRINVAESMSSISWDDCLWLFALSAAVDCPLDADTSAAFRSLLR
KCASVRAEKLELDDEVAMLNILVTISGRYFGQLQN
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgactgcaactccaaacctaccgtcggtctcgatcgtcaagaccaactacgg
cagttatcatcgtccgaccacaaagacggcgtcgttcaagaaatgttcgatttagaccaa
accgacgccgttttgcagaaggccgactctgaaaattttgaagtagaagaaaacagagat
gaacgagataagaacgccttcttcgacgtcgtaagtcaagaagccggagcctctagtaat
tgctttgacagcgccgttttggagaaaagtgaagaacgaggttttgaaggagaagagaga
gacgacgccgtttgggggaggaaaggagaactactcctccacgacgacgtcgtaaaacca
gaagctgaaggagaagaaaaggtggaaattgcagaagccgctacttcttgctttgacgac
gccgtattggagaaaagcgaagaacgaggtttcgaagcagaaatgagagacggcaccgtt
ttggtgggaaatgaaaaagttgttctccacgacgtcctaagacaagaagctgaaggagaa
gaaaaggtggaaattgccggagccactacttcttgctttgacgatgccgtttcagagaaa
cgtgaagaacgaggttccgaagcagaaacaagaaacggcaccgttttggagggtaaagga
gagcactgcgtggaagaggcgatgggtgcttatgctactggcttaaacgatggcgtttgc
aagaatcaagaatcgaagcctgttgattgtgagacagacgactccgttttggagaagggt
gaaatgggcgtctctggaattcaagaaatattgaaaattgatgggaaattgaatgaaaaa
aactgttgtatgaaaattgaggtagttgatgaaacggcattagtagggtttggaaaggaa
agaaaagccatcaatttctctgaaaattcaaggaagaatgtgaatcataagaggccaaga
aggaggggcaaaagtggggctgatgataatcagaagtttgttgatatgggcttggctcag
aattgtggaaccagaaagaatgagaaaggggggaagagagtttatacgaggacggagttg
ggggtgttgagatttgtggcagtggattggcagaggaagaaatggacagaggtttattgt
ggacttggtcctgctgtgcaggaggagtatgatggactggtgggttctgataatcatagt
caatttcatcatcagcagctgcagcagcagaagaagaagcacacccgtgttgatttcaat
ccgcggttcagaaatgaggcacgctcttcagtttttgccctttcaggtgaagaatattca
gaaaatgcagagaatgaaaatgcatatgaaaatctgatagatcctcctggtcttcacgta
attgagcaggatgagtgcttagaagatgatagtgatgaagactatagtagcattcagaaa
cctgcgttttttgttacaggtgaacctgattttgattcaggccctccagaagatggtcta
gaatatcttagacgtgtaaggtgggaatctgcacagatacccaaagtgaaggttgccaag
gttgatagaactaaactaaacaaggagcaaactgtttacatgcctctaattcctgatata
gcaaagtgtccagtgcacttaatgccactcaaagagtgggaggatgcatttcttgccgat
ttctcagagttgaggctggccttatcaagacttgaaaatatggaagctaaggtgcagtca
tcttctactgttcatgagggacaatcctcctccaggcccttcgatagctttcttcttgaa
aacatcgataatatgccttttgtggaagattcaagccaatctgtgcagtgctgtacacct
gaaacatgtggcaatccatgctcttctgttgtcgccaatgataatgatggtatggattct
gtagcaagtcccagttctagatcgcatataagtggagtttctgaaaaatgccccaccctg
tctatgattttgcggatggactctgtagctcgagtttctatgctgaggaagcgtataaat
gtggctgaaagtatgagtagtatatcttgggatgattgtctatggctatttgctctgtct
gcagcagttgattgtccccttgatgccgacacttctgcagcctttaggtcattgttgcgg
aagtgtgcaagcgtgcgagcagagaagttggaattggatgacgaagttgccatgcttaat
attctggtaaccatatctgggagatacttcggacaactacaaaattaa
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