Coffea arabica (coffee): 113738106
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Entry
113738106 CDS
T11342
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial-like isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113738106
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
carb01007
]
113738106
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
113738106
Enzymes [BR:
carb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
113738106
Amino acid related enzymes [BR:
carb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
113738106
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
113738106
Prokaryotic type
Other AARSs
113738106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1_2
tRNA-synt_1e
DUF7685
Motif
Other DBs
NCBI-GeneID:
113738106
NCBI-ProteinID:
XP_027121091
UniProt:
A0A6P6X293
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All DBs
Position
3e:1531330..1544051
Genome browser
AA seq
1076 aa
AA seq
DB search
MAVQNSSYKVILLKNCPSFRKTPPVSFLYLRKCSSSQVLSLLSLLNVRHYSTYPGPEICS
SAKRRSRGPVMAAKKASEGLKKDDGKYKHTVDLPQATFGLRANSTVREPEIQKLWDEHQV
FKRVVDRNDGGSFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQNFKVQYVPGWDCH
GLPIELKVLQSLDEVTRKELTPLKLRKKAAKFATATVKAQMASFRRYGVWGDWDHPYLTL
DPEYEAAQIEVFGKMAIQGFIYRGRKPVHWSPSSRTALAEAELEYPEGHVSNSMYAIFKL
VNAPNLCNLLEEFFPNLCLAIWTTTPWTIPANAAVAVNPKLQYAIVEVQSGSTDSSTLSG
NAKKKLGNVFEEYEKLFLIVALDLVPTLEAKWGKKLLIKKKLLGSDLENCSYVHPIDGRD
CPVVIGGDYITTESGTGLVHTAPGHGQEDYVTGLKYGLPILSPVDDDGKFTEEAAQFNGL
DVLGDGNIAVIEYLDKHLSMLMVEPYKHKYPYDWRTKKPTIFRATEQWFASVEGFRNAAI
DAISQVTWIPSQGEKRIIAMTSSRSDWCISRQRTWGVPIPVFYHVETKEPLMNEETIDHV
KSIISQKGSDAWWYMTVEELLPDTYHDKASDYEKGTDTMDVWFDSGSSWAAVLEKRNGLS
SPADLYLEGTDQHRGWFQSSLLTSVATKGRAPYSAVVTHGFVLDERGYKMSKSLGNVVDP
VTIIEGGKNKVESPPYGADVLRLWASSIDYTGDVMIGHQVLRQMSDIYRKLRGTLRFLLA
NLHDWKVDYVVPYHELPKIDQHALFQLENVVKNIKESYEQYQFFKIFQIIQRFVIVDLSN
FYFDVAKDRLYVGGTTSFTRRSCQSVLAEHLLSIVKVVAPILPHLAEDVWQHLPFQYTNE
EGQIAKFVFESRWPIIKERYLAFPVEEVNFWGKILELRTEVNKVLEVARSGKLIGSSLEA
KVYLHTSDDTLAARLTEACKSETDADTLPRIFITSQVEVLPSLENELTEDASYTGEFLIG
GKDRVWIHVTRAAGSKCERCWNFSPQVGSFDEHPSLCSRCYNVVAGQPEPALAAVS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccaaaactcctcttacaaggtgatattgctgaagaactgtccatcattcagg
aaaactccacccgttagcttcctgtatctcagaaaatgttcatcatctcaagtgctatct
ctgttatctctgttaaatgtgagacactattctacctaccctggtcctgaaatctgttca
tctgcaaaaagaaggtctcgtggacctgttatggcagcaaaaaaagcgtctgaaggatta
aagaaggatgatggaaaatacaaacacacggttgacctaccacaggcaacatttggcttg
agggcaaattctacagtaagggagcctgagattcagaaattgtgggatgagcatcaggtg
tttaagagagttgttgataggaatgatggaggtagttttattctccatgatggtcctcct
tatgctaatggtgatttgcacatggggcacgctttaaataaaattttgaaggatattata
aaccgttacaagcttcttcaaaattttaaggttcaatacgttccagggtgggattgtcat
ggcttaccaatagaactaaaagtattgcagtcactagatgaggttaccaggaaggagctg
acaccattaaagttgaggaaaaaggcagcaaaatttgccactgcaactgtgaaagctcaa
atggcatcatttaggagatatggagtatggggagactgggatcatccttatctaactctt
gatccagagtatgaagctgcacagattgaagtatttggcaaaatggctattcaagggttt
atctataggggaagaaaaccagttcactggagtccgtcatcacgcactgctcttgctgaa
gcagagttggagtatcctgaagggcatgtttccaacagcatgtatgccattttcaaacta
gtcaatgctccgaatttgtgcaatttattggaggaattcttccctaatttgtgcttggct
atctggaccacaactccatggactatacctgctaatgctgctgttgcagtgaatcctaag
cttcaatatgccattgttgaagtgcagtcgggttccacagatagttctacactgtctggc
aatgcaaaaaagaaacttggcaatgtttttgaagaatatgagaagctgttccttattgtg
gcattagaccttgtaccaactctagaagcaaaatggggcaaaaaacttcttataaagaaa
aaactgttgggttcggatctcgaaaattgcagctatgttcatccaatagatggcagagac
tgtcctgttgtcattggtggtgattacatcacaacagaatcaggaactggactagttcat
actgctcctggtcatggccaggaggattatgtaactggcctcaaatatggtctacctatt
ctttcccctgtggatgatgatggcaaattcacagaagaagctgcacagttcaatgggctt
gatgtgcttggtgatggaaatattgcagttatagaatacttggacaagcatttgtcaatg
cttatggtggaaccctacaaacacaagtatccatatgattggaggacaaaaaagcccacg
atttttagggcaactgaacaatggtttgcatcagtggaaggattccgtaatgctgcaatt
gatgcaatcagccaagtgacatggattccttctcagggagaaaaaagaatcattgcaatg
acttcaagccgttctgattggtgtatatcacggcaaaggacatggggtgttcccattcca
gtgttttaccatgtggaaacaaaggagccactgatgaatgaagaaaccattgatcatgtc
aaatctataatttctcaaaagggtagtgatgcatggtggtatatgacggtagaggaatta
cttcctgatacttatcatgataaagcatcagattatgaaaaagggactgatacaatggat
gtttggtttgactcagggtcttcatgggctgctgtgctggagaaaagaaatggactcagt
tctcctgcagatttgtatcttgagggtacagatcagcatcgcggttggttccaaagctcg
ttgttgacaagtgttgctactaaaggaagggctccatattctgctgttgttactcatggg
tttgtcttggatgagagaggatataagatgagtaaatctctgggcaatgttgttgatcca
gttacaatcattgaaggaggaaaaaacaaagtggaatctcctccttatggtgctgatgtc
ctaagactctgggcttctagcatagattatactggggatgtgatgattgggcatcaagtc
ctccgtcaaatgtctgatatctaccggaaattacggggaactctaagatttcttttggca
aaccttcatgactggaaagttgattatgttgttccatatcatgaacttccaaagattgat
cagcatgcattatttcagcttgagaatgttgtcaagaacattaaggagagttatgaacaa
tatcaattcttcaaaatttttcagattattcaacgctttgtgatcgtcgatctctcaaac
ttttactttgacgttgccaaagatcgtctttacgttgggggaacaacgagctttacgagg
aggagttgccaaagtgtccttgcagaacacttactttccatagtaaaggtggttgcgccc
atcctcccgcatttggctgaggatgtttggcaacatcttccttttcaatatactaatgaa
gaagggcaaattgccaaatttgtctttgagtcaagatggcctataattaaggaaagatat
ctcgcttttcctgtcgaagaagtcaatttttgggggaaaattcttgagctaagaactgag
gtaaataaagtgctagaggttgctcgatctgggaagctaattggttcaagtttagaggcg
aaggtctacctccacacatcagatgataccctagctgcaagattgacagaagcttgtaaa
tctgaaactgatgctgatacgctacctcgtatattcattacatctcaggtggaggttctt
ccatccctggaaaacgagcttactgaagatgcatcatacacaggagaatttctcattgga
ggaaaagacagagtatggattcacgtaacgcgtgcagcgggctcaaaatgcgaacgatgt
tggaatttttcgcctcaagttggctcttttgatgagcacccttcactttgcagccgttgt
tacaatgttgtcgccggtcagccagaacctgctctggcagctgtgagctga
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