Coffea arabica (coffee): 113742434
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Entry
113742434 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K17925
sorting nexin-13
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
carb04990
]
113742434
Domain-containing proteins not elsewhere classified [BR:
carb04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
113742434
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
113742434
NCBI-ProteinID:
XP_071901516
UniProt:
A0ABM4U2K4
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Position
4c:2459284..2469463
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AA seq
1132 aa
AA seq
DB search
MSSDRQAAPAAAATVTVRDLVEEGKKRIVFLVVCVVGLSYLMSLTSSSVLVNLPAAAVMI
IIFRYWSLDFEMRRKAAIYKSKPSSVYVSSEKKRSEGPIIVVEKPDWRRKVNSPIVEDAI
DQFTRHIVSEWVTDLWYSRITPDKQGPEELVQIMNGVLGEISCRMRNINLIDLLTRDVIN
LLCSHLELFRATKAKIEKQHSRSLTIEERDRELKFVLNAENKLHPSLFSAEAEHKVLQHL
VNGLMSITFKPEDLQCSLFIYVVRELLACAVMRPVLNLVSPRFINERIESLVISSSKTQK
VMGAAEVGSQPKPNGSTKISSDHFSRFLDHSDKGVELVQLKKDCPTASGEKHETDITNGN
VISKDPLLSMDARSTRSWSALPSEDHTGEGKGIQRHRSGGEWGEMLDALSRRKTEALAPE
HFDNMWAKGRNYRRKEVSDQSADKISQGSLDQSKEFSRKKKDLDCKVSGSNKLTIANENC
FQSGCHNQNSSYRDEDEHEIIQSDEVESSVSTSSYTTGDEEISAVTGLDSPSVRVWDAKN
KKNVTNIHHPLEVFDGRKPRRARKKNHHSQKLTKAMSVRKRSRSISQKAHVWQEVERTSF
LSGDGQDILNSSIGNIKHDDSSDDSGAEMVNRISSGSTASSFLSSTSLPESYNLTANPSK
NSIIADSFLTLRCEVLGANIVKSGSKTFAVYSISVTDVNGYSWSIKRRFRHFEELHRRLK
EFPEYNLHLPPKHFLSAGLDVSVIQERCKLLDKYLKNLMQLPTVSSSIEVWDFLSVDSQT
YIFSNPLSIIETLSVNFVVTAHERNKNYQSNVGIVRDPVSSKKEHLDAVKKETAFGIKHE
GMPERSQMNAKSLALSPPKKPLNVVRKTLEDSSSDSDSTTHRSLISHKNLGKMSNSGQAG
FNASSELHTDAASDPTLPSEWVPPNLSLPILNLVDVIFQLQDGGWIRRKAFWVAKRVLQL
GMGDAFDDWLIEKIQLLRRGSVVASGIRRLEQILWPDGIFLTKHPRRQKPPLSASPSQSP
SHGRPPTPLSSPKMENVEMMDDTQQKEAERRAKFVYDLMIDKAPAAVVGLVGHKEYEQCA
KDLYYFIQSSVAMKQLAFDLLQLLLLSAFPELDYVFRQLHEEKEKFGELKLD
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgacaggcaggcggccccagcggcggcagcgacggtgacggttcgagacctg
gtggaggaaggaaagaagaggattgtttttttagtcgtttgcgttgttggactgtcctat
ctcatgtctctgacaagctcttcagttttagtcaacttgcctgctgctgctgttatgata
atcatcttccgttattggtctttggattttgagatgcggagaaaagctgcaatttacaaa
agcaagccatcctctgtttatgtatcttccgagaaaaaacgttccgaaggccctatcatt
gttgttgagaagcccgactggagacgaaaagtgaattctcctatagttgaggatgcaata
gatcagttcaccagacacatagtctctgagtgggttacagatctgtggtactctcgcata
actccagataaacaaggtccagaagagcttgtccagatcatgaatggggtgctgggtgaa
atttcatgtcgcatgagaaacatcaaccttatagatcttttgacaagggatgttatcaat
ctcttgtgctcccatttggagctctttcgtgcaactaaggcaaagatcgagaagcaacac
tccagatccttaactatagaagaacgagacagagaacttaaatttgtgctgaatgcagag
aacaaattgcacccgtctttattttctgctgaagctgagcacaaggttctgcagcatctc
gtgaatggcctcatgtccatcacattcaagcctgaagatctgcagtgttctttgtttatc
tatgtagttagggagcttcttgcttgtgcagtaatgaggccagtgctaaatttagttagc
ccaaggttcatcaatgagaggattgaatccctagtcatttcctcaagtaagactcagaaa
gtcatgggtgcagcagaagtaggctcacagcccaaaccaaatggatccacaaaaatatca
tctgatcacttttctcgctttctagatcactcagacaaaggtgtggaactcgtacagtta
aagaaggattgccccacggctagtggggagaagcatgaaacagatatcacgaatggaaat
gttatctcaaaggatccattgctttccatggatgcacgttctactcgttcttggagtgct
ttgccttcggaagatcacactggtgagggaaaaggtatccagcgacatcgatctggtgga
gaatggggagaaatgcttgacgcactttcccgcagaaaaactgaagccctagctccggaa
cattttgacaacatgtgggcaaaaggaagaaactatagacggaaggaagtctcagatcag
tcggctgataagatttcacaaggttcactggaccagtcaaaggaattttctagaaagaaa
aaggacttagactgcaaggtttctggatccaataagctgactattgccaatgaaaactgt
tttcaaagtgggtgccataaccaaaactcctcatatagagacgaagatgagcatgagatc
atacaatcagatgaggtagaatcatcagttagcactagttcttatactactggagatgaa
gaaatcagtgctgtcacaggtcttgattctcctagtgtcagagtgtgggatgctaaaaat
aaaaaaaatgtcactaatattcatcatccgcttgaagtttttgatggccgtaagccaaga
agggcacggaaaaagaaccaccattctcaaaagttaactaaagcaatgtcggtcagaaaa
aggtctagatcaatcagtcagaaagctcatgtttggcaagaggttgaaaggacaagcttc
ttatcgggagatgggcaggatatactgaattcttctattggtaatattaaacatgatgac
tcaagtgatgattcaggggcagaaatggttaatagaatttctagcggatcaactgcttca
tcatttctgtcctcaacttctttacctgaaagttataatctgacagccaatccctcaaag
aattctataatagctgattcttttttaaccctaagatgtgaggtattgggtgccaacatt
gtgaagagtggttccaaaacttttgccgtatactccatatctgttactgatgtgaatggt
tatagttggtctatcaaaagaaggtttcgacattttgaggagctacatcggcgtcttaag
gagtttcctgagtataatcttcatttgccacccaagcattttttatctgctggtcttgat
gtttcagtcattcaagagcggtgcaaattgcttgataagtacttgaagaacctcatgcag
cttccaacagtttccagctctatagaagtttgggacttccttagtgttgactctcagaca
tatattttctcaaacccgttgtcgattatcgagacattatcagttaacttcgttgttacg
gcacatgaaaggaataaaaactaccagagcaatgttggaattgtcagagatcctgtatct
tccaagaaagaacatcttgatgctgtgaaaaaggaaactgcatttggaattaagcatgaa
gggatgccagaaagatcacaaatgaatgcaaaaagtctagccctttctccacctaaaaaa
cctcttaatgtggtcaggaaaaccttagaggattcaagtagcgactctgatagtaccacg
cacaggagtctaatttcacacaagaacttgggcaagatgtcaaactcaggacaagcgggt
tttaatgcttcatctgagttgcatacagatgctgccagtgatccaaccctccctagtgag
tgggtgccaccaaatttgagtttgcccatattgaacttggttgatgtcatttttcagcta
caagatggcggatggatcaggagaaaggctttctgggtggccaaacgggtattacagttg
ggaatgggtgatgcctttgatgattggctgatagagaaaatccaacttctgcgtagggga
tcagtagttgcatcaggaattagacgccttgagcagattctttggcctgatggtatattc
ctaaccaagcatccaaggcgtcaaaaacctcctctttctgcaagtccgtcccagagccct
tctcatgggaggcctccaactcctctatcttcacctaagatggagaatgttgagatgatg
gatgatacacagcaaaaggaagccgaacgacgagccaaatttgtttatgatctaatgatt
gataaagcaccagctgctgttgtgggtcttgttggtcacaaggaatatgaacaatgtgca
aaggatctatattacttcattcagtcatctgttgctatgaagcagctagcttttgatctt
ctacagctgcttctcctgtcagcattcccggagttagattatgtattcagacaattgcat
gaagagaaggaaaagtttggggagcttaaattagattag
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