Coffea arabica (coffee): 140005904
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Entry
140005904 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K17925
sorting nexin-13
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
carb04990
]
140005904
Domain-containing proteins not elsewhere classified [BR:
carb04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
140005904
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
140005904
NCBI-ProteinID:
XP_071903226
UniProt:
A0ABM4U7H6
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Position
4e:2483366..2493701
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AA seq
1132 aa
AA seq
DB search
MSSDRQAAPAAAATVTVRDLVEEGKKRIVFLVVCVVGLSYLMSLTSSSVLVNLPAAAVMI
IIFRYWSLDFEMRRKAAIYKSKPSSVYVSSEKKPSEGPIIVVEKSDWRRKVNSPIVEEAI
DQFTRHIVSEWVTDLWYSRITPDKQGPEELVQIMNGVLGEISCRMRNINLIDLLTRDVIN
LLCSHLELFRATKAKIEKQHSRSLTIEERDRELKFVLNAENKLHPSLFSAEAEHEVLQHL
MNGLMSFTFKPQDLQCSLFIYVVRELLACAVMRPVLNLVSPRFINERIESLVISISKTQK
VMGAAEVGSQPKPNGSTKISSDHFSRFLDRSDKGVELVQLKKDCPTASGEKHETDITNVN
VISKDPLLSMDARSTRSWSALPSEDHTGEGKGIQRHRSGGEWGEMLDALSRRKTEALAPE
HFDNMWAKGRNYRRKEVSDQSADKISQGSLDQSKEFSRKKKDLDCKVSGSNKLTIANENC
FQSECHNQNSSYRDEDEHEIIQSDEVESSVSTSSYTTGDEEISAVTGLDSPSVRVWDAKN
KRNVTNIHHPLEVFDGRKPRRARKKNHHSQRLTKAMSVRKRSRSISQKAHVWQEVERTSF
LSGDGQDILNSSIGNIKHDDSSDDSGAEMVNRISSGSTASSFLSSTSLPESYNLTANPSK
NSIIADSFLTLRCEVLGANIVKSGSKTFAVYSISVTDVNGHSWSIKRRFRHFEELHRRLK
EFPEYNLHLPPKHFLSAGLDVSVIQERCKLLHKYLKNLMQLPTVSSSIEVWDFLSVDSQT
YIFSSPLSIIETLSVNFVVTAHERNKNYQSNVGIVRDPVSSKKEHLDAVKKETAFGIKHE
GMPERSQMNAKSLALSPPKKPLNVVRKTLEDSSSDSDSTTHRSLISHKNLGKMSNSGQAG
LHASSELHTDAASDPTLPSEWVPPNLSLPILNLVDVIFQLQDGGWIRRKAFWVAKRVLQL
GMGDAFDDWLIEKIQLLRRGSVVASGIRRLEQILWPDGIFLTKHPRRQKPPLSASPSQSP
SHGRPPTPLSSPKMENVEMMDDTQQKEAERRAKFVYDLMIDKAPAAVVGLVGHKEYEQCA
KDLYYFIQSSVAMKQLAFDLLQLLLLSAFPELDYVFRQLHEEKEKFGELKLD
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgacaggcaggcggccccagcggcggcagcgacggtgacggttcgagacctg
gtggaggaaggaaagaagaggattgtttttttagtcgtttgcgttgttggactgtcctat
ctcatgtctctgacaagctcttcagttttagtcaacttgcctgctgctgctgttatgatc
atcatcttccgttattggtctttggattttgagatgcggagaaaagctgcaatttacaaa
agcaagccatcctctgtttatgtatcttccgagaaaaaaccttccgaaggccctatcatt
gttgttgagaagtccgactggagacgaaaagtgaattctcctatagttgaggaagcaata
gatcagttcaccagacacatagtctctgagtgggttacagatctgtggtactctcgcata
actccagataaacaaggtccagaagagcttgtccagatcatgaacggggtgctgggtgaa
atttcatgtcgcatgagaaacatcaaccttatagatcttttgacaagggatgttatcaat
ctcttgtgctcccatttggagctctttcgtgcaactaaggcaaagatcgagaagcaacac
tccagatccttaactatagaagaacgagacagagaacttaaatttgtgctcaatgcagag
aacaaattgcacccgtctttattttctgctgaagctgagcacgaggttctgcagcatctc
atgaatggcctcatgtccttcacattcaagcctcaagatctgcagtgttctttgtttatc
tatgtagttagggagcttcttgcttgtgcagtaatgaggccagtgctaaatttagttagc
ccaaggttcatcaatgagaggattgaatccctagtcatttccataagtaagactcagaaa
gtcatgggtgcagcagaagtaggctcacagcccaaaccaaatggatccacaaaaatatca
tccgatcacttttctcgctttctagatcgctcagacaaaggtgtggaactcgtacagtta
aagaaggattgccccacggctagtggggagaagcatgaaacagatatcacgaatgtaaat
gttatctcaaaagatccattgctttccatggatgcacgttctactcgttcttggagtgct
ttgccttcggaagatcacacaggtgagggaaaaggtatccagcgacatcgatctggtgga
gaatggggagaaatgcttgacgcactttcccgcagaaaaactgaagccctagctccggaa
cattttgacaacatgtgggcaaaaggaagaaactatagacggaaggaagtctcagatcag
tcagctgataagatttcacaaggttcactggaccagtcaaaggaattttctagaaagaaa
aaggacttagactgcaaggtttctggatccaataagctgactattgccaatgaaaactgt
tttcaaagtgagtgccataaccaaaactcctcatatagagatgaagatgagcatgagatc
atacaatcagatgaggtagaatcatcagttagcactagttcttatactactggagatgaa
gaaatcagtgctgtcacaggtcttgattctcctagtgtcagagtgtgggatgctaaaaat
aaaagaaatgtcactaatattcatcatccgcttgaagtttttgatggccgtaagccaaga
agggcacggaaaaagaaccaccattctcaaaggttaactaaagcaatgtcggttagaaaa
aggtctagatcaatcagtcagaaagctcatgtttggcaagaagttgaaaggacaagcttc
ttatcgggagatgggcaggatatactgaattcttctattggtaatattaaacatgatgac
tcaagtgatgattcaggggcagaaatggttaatagaatttctagcggatcaactgcttcg
tcatttctgtcctcaacttctttacctgaaagttataatctgacagccaatccctcaaag
aattctataatagctgattcttttttaaccctaagatgtgaggtattgggtgccaacatt
gtgaagagtggttccaaaacttttgccgtatactccatatctgttactgatgtgaatggt
catagttggtctatcaaaagaaggtttcgacattttgaggagctacatcggcgtcttaag
gagtttcctgagtataatcttcatttgccacccaagcattttttatctgctggtcttgat
gtttcagtcattcaagagcggtgcaaattgcttcataagtacttgaagaacctcatgcag
cttccaacagtttccagctctatagaagtttgggacttccttagtgttgactctcagaca
tatattttctcaagcccgttgtcaattatcgagacattatcagttaacttcgttgttacg
gcacatgaaaggaataaaaactaccagagcaatgttggaattgtcagagatcctgtatct
tccaagaaagaacatcttgatgctgtgaaaaaggaaactgcatttggaattaagcatgaa
gggatgccagaaagatcacaaatgaatgcaaaaagtctagccctttctccacccaaaaaa
cctcttaatgtggtcaggaaaaccttagaagattcaagtagcgactctgatagtaccacg
cacaggagtctaatttcacacaagaacttgggcaagatgtcaaactcaggacaagcgggt
ttgcatgcttcatctgagttgcatacagatgctgccagtgatccaaccctccctagtgag
tgggtgccaccaaatttgagtttgcccatattgaacttggttgatgtcatttttcagcta
caagatggcggatggatcaggagaaaggctttctgggtggccaaacgggtattacagttg
ggaatgggtgatgcctttgatgattggctgatagagaaaatccaacttctgcgtagggga
tcagtagttgcatcaggaattagacgccttgagcagattctttggcctgatggtatattc
ctaaccaagcatccaaggcgtcaaaaacctcctctttctgcaagtccgtcccagagccct
tctcatgggaggcctccaactcctctatcttcacctaagatggagaatgttgagatgatg
gatgatacacagcaaaaggaagctgaacgacgagccaaatttgtttatgatctaatgatt
gataaagcaccagccgctgttgtgggtcttgttggtcataaggaatatgaacaatgtgca
aaggatctatattacttcattcagtcatctgttgctatgaagcagctagcttttgatctt
ctacagctgcttctcctgtcagcattcccggagttagattatgtattcagacaattgcat
gaagagaaggaaaagtttggggagcttaaattagattag
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