KEGG   Coffea arabica (coffee): 140014508
Entry
140014508         CDS       T11342                                 
Name
(RefSeq) uncharacterized protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
carb  Coffea arabica (coffee)
Pathway
carb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140014508
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:carb03019]
    140014508
   03041 Spliceosome [BR:carb03041]
    140014508
   03032 DNA replication proteins [BR:carb03032]
    140014508
Messenger RNA biogenesis [BR:carb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     140014508
Spliceosome [BR:carb03041]
 Complex A
  U1 snRNP components
   Sm proteins
    140014508
  U2 snRNP components
    140014508
 Complex B
  U1 snRNP components
    140014508
  U4/U6.U5 tri-snRNP components
    140014508
 Complex C
  U2 snRNP components
    140014508
DNA replication proteins [BR:carb03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     140014508
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 140014508
NCBI-ProteinID: XP_071921531
UniProt: A0ABM4VPT9
LinkDB
Position
9e:complement(35065402..35068337)
AA seq 283 aa
MSMSKSSKMLQYINYRMRVHIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPTKGSKTK
EEREDRRTLGLVLLRGEEVISMTVEGPPPPDESRAKAASAASAIPGPGIGRAAGRGVPSG
PLVQAQPGLAGPVRGVGGPSPGMMQPQISRPAIPQVSAPPISYPQQPPQVVRPGGQMPPP
PMPPMGRGPVPMAPPPQFRPGGPPPPGQFPPQFGQRPMVPPPPQFRPGGPPPPGPPRPGM
PGAPPPQSQPPRPGMPPPPPGGVFGPPRPGMPPPPNAPPQNQQ
NT seq 852 nt   +upstreamnt  +downstreamnt
atgtcgatgtcgaagagctccaagatgcttcagtacatcaactaccggatgcgggtccac
atccaagacggccgtcaattagtcggaaaatttatggctttcgaccgtcacatgaacctc
gtcctcggcgactgcgaggagttccggaaattgccccctacgaaaggctccaaaactaag
gaagaacgagaggatcgccgcactctcggcctcgtcctcctcaggggcgaagaagtaatt
tccatgactgtcgaaggccctcctcctcccgacgagtctcgtgctaaagctgcctcagct
gcttcggcaattcctggcccgggtattggtcgggctgcgggccgtggtgttcccagcggg
ccgcttgttcaggcacagcccggtcttgctggcccggttagaggagttggtgggccttct
ccggggatgatgcagccgcagatttctaggccggcgattcctcaggtgtcggctcctccg
atttcgtacccgcagcagccgcctcaggtggtgaggcctggagggcaaatgccaccgccg
cctatgccacctatggggagagggccggtgcctatggcgccaccgccccagtttaggcct
gggggcccgcctccgcctgggcagttcccgcctcagttcggacagaggcctatggttcct
ccaccacctcagtttaggccagggggcccacctccgcctggaccacctcgacctgggatg
cctggagctcctccacctcagtctcagcctcctcgtcccggtatgcccccgcctccacct
ggtggtgtgtttggaccacctcgtccaggaatgccgcctccacctaatgctccaccgcag
aaccagcagtag

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