Coffea arabica (coffee): 140036783
Help
Entry
140036783 CDS
T11342
Name
(RefSeq) DNA polymerase kappa-like isoform X1
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
carb Coffea arabica (coffee)
Pathway
carb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
140036783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carb03400
]
140036783
Enzymes [BR:
carb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
140036783
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
140036783
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
zf_UBZ
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
140036783
NCBI-ProteinID:
XP_071935625
UniProt:
A0ABM4WV14
LinkDB
All DBs
Position
2e:complement(18282912..18290304)
Genome browser
AA seq
718 aa
AA seq
DB search
MAEISKSSESSLVSASDACCSELKPWESYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSK
YFENEERKEACMMQKIENMRSRSAKLTAADLSHYQKVADKKILELEAHRDLSRIWLHVDM
DAFYAAVETLCNPALQGKPMAVGSMSMISTANYEARKFGVRAAMPGFIARKLCPQLIFVP
VDFKKYTHYSELTRKVFYEYDPTFLGASLDEAYLDITNVCQERGVTGAEVAEELRKNVYN
ETGLTCSAGVAPNRLLAKVCSDINKPNGQFVLQNDRMAVMTYISSLPIRKIGGIGKVTEQ
ILKNVFGITTCEEMLQKSSFLCALFSRSSSDFFFSVALGLGGTDTPQIRFRKSISNERTF
SATGDEELLHKKIVDLAEMLSADMRKEGISGKTLTLKLKTASFEVRTRAVTLPNFISSSE
DILKHASKLLKAELPVSLRLIGLRMSQFSDDKNDVPSDPTQRTLSNYVIPGGPSRSNIND
SMQLGSEISDSAFSIDTDGDFPIDSHERCSESVDASSYDQMTNVPVGNCILGQKTEEVWS
NVEPTTNEVTENDNEPSIVGKSVKPFANGDSLPVKRDPFLGGFDGSRGHTSENRIHHEDL
NAGFSSHQRVSFFWAEDYKCSICGVELPPSFVEERQEHSDFHLAERLQEEESGDNVISLT
VKRSAYWSSVLKSSMCARLVQREHTIQDRKTRKKQKPSPTGGKHVPIDVYFAKTSQNF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaatctcaaagagcagcgaaagctcactggtctcagcctcggatgcctgctgt
tctgagcttaagccatgggaatcctatcacactgtctacactaacgccaaagcaggtatg
gaaggggtggataaggaaagagtgcagagaatagtttacgagatgagtaaaggttctaaa
tattttgagaatgaggaaagaaaggaggcttgtatgatgcagaaaatcgaaaacatgcgc
tcccgttccgctaagctcactgctgctgatttgtctcactatcagaaggttgctgataag
aagattttagagctggaagcgcatcgtgatttatcgaggatttggctgcacgtagatatg
gatgctttttatgctgctgttgagacattatgtaatccggcactacaaggcaagcccatg
gctgttggtagcatgtctatgatctcgacagccaattacgaggcaaggaaatttggtgta
cgagctgctatgcctggatttatagcacgtaaattgtgtcctcaattgatttttgttcct
gttgacttcaagaaatatacccattatagtgaattaacaagaaaagttttctatgaatat
gatcccacctttttgggtgcaagtttggatgaggcatacctggatataacaaatgtctgc
caagaaagaggcgtaaccggtgcagaggtggctgaggagctcaggaagaatgtctacaat
gagacgggccttacttgtagtgctggagttgcaccaaatcgcttacttgctaaggtttgc
tctgatattaacaagccaaatggtcaatttgtactacagaatgatcgcatggctgtcatg
acatatatttcttcacttcctataagaaagataggggggattggtaaggtaactgaacag
atcttaaagaatgtctttggaattacaacatgcgaggagatgctgcaaaagagtagtttt
ctctgtgcacttttctcccgctcttcatcagactttttcttctcagttgctctgggactt
gggggaaccgatacccctcaaattaggtttaggaaaagcataagcaatgaaaggacattt
tctgccactggtgatgaggaattgcttcacaagaaaatagtggatcttgctgaaatgctt
tctgctgacatgagaaaagagggcattagtggaaaaacattgacgttaaagttgaaaact
gcatcctttgaggtccggacgcgtgctgtaactttaccaaattttataagctccagtgag
gatattttgaagcatgcttcaaaactattgaaggccgaactccctgtatctttgagactg
ataggactccggatgtctcagttcagtgatgacaaaaatgatgttccttctgatcctaca
caaagaactctttccaactatgtcattccgggaggtccttccagaagtaatatcaatgac
agcatgcagttgggctcggaaattagtgatagtgctttttctattgacacagatggagat
tttccaattgacagccatgagagatgttctgaatcagtggatgcaagcagttatgaccaa
atgaccaatgttcctgttgggaactgcatcctggggcagaagactgaagaagtttggagc
aatgttgaacctacgaccaatgaggtgacagaaaatgataatgaacctagtatagtaggg
aaatcagttaagccatttgcaaatggagattctcttccagtaaaaagggatccttttctt
ggagggtttgatggaagccgtggacatacatcagaaaacaggatccaccatgaagatctt
aatgcagggttttcatcacatcagagagtatcatttttctgggcggaggattacaagtgc
tcaatatgtggggtggaactgcctccaagttttgttgaggaaaggcaggagcattcggat
ttccatcttgctgagaggcttcaagaggaggagtcaggagacaatgttataagccttacg
gttaagcggagtgcctactggagttctgttctaaagagttcaatgtgtgccaggttggtc
cagagagaacatactatccaggacaggaagacaaggaaaaagcagaaaccatctccaaca
ggtggtaaacatgttccaatcgatgtctactttgcaaagacgagtcaaaatttctga
DBGET
integrated database retrieval system
