Collimonas arenae: LT85_0272
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Entry
LT85_0272 CDS
T03512
Symbol
cmeC
Name
(GenBank) RND efflux system
KO
K18903
outer membrane protein, multidrug efflux system
Organism
care
Collimonas arenae
Module
care_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_0272 (cmeC)
01504 Antimicrobial resistance genes [BR:
care01504
]
LT85_0272 (cmeC)
Transporters [BR:
care02000
]
Other transporters
Pores ion channels [TC:
1
]
LT85_0272 (cmeC)
Antimicrobial resistance genes [BR:
care01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
LT85_0272 (cmeC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Reprolysin_2
Motif
Other DBs
NCBI-ProteinID:
AIY39432
UniProt:
A0A0A1F995
LinkDB
All DBs
Position
300234..301676
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AA seq
480 aa
AA seq
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MNTPRRLALVSAVVWLAGCASGPDYKKPDIEMPAAWQFEEPFHIATPNDGALKGNWWETF
QDARLNQLEQLALTQNQTLRIAATRLEQARQQVTVSAAGLFPQVSLQAGAARQKISANRP
LSAYGTPSQSTVQNNFQLGFAVSYEADLFGRVRRTVEQARASSEQAGADFENAKLVLMSE
LAADYFNLRELDAEIDVVRQGIALQQKSLEFITDRHDLGVASGLDLAQQQALLDASKTQL
ELLQNQRMQYEHALATMTGTPAPQFKLEPALTLMTAVLSPLPVGLPSDLLQRRPDVASAE
RAVAAANAGIGVARAAYFPTILLQPNGGWDSNQIGNLLSAPSLLWSLGTSITQNLFDAGK
TRAGVKIAEAGYTAAVANYRQTVLVAMQEVEDGIDGLAVLGRAGKQAEASVHSSQRVLDL
ANDRYTGGLDTYLDVITAQQTLLTNQRQMVQINGQRMLTSVYLVKALGGGWQGDTAQAAR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgccgcgccgcctcgcactggtcagcgccgtcgtctggctggcgggttgcgcc
agcggtcctgactataaaaaacctgacatcgagatgccggcagcctggcaattcgaggag
ccgttccatatcgcgacgccgaacgacggcgcgctgaaaggcaactggtgggagacgttc
caggatgcccgcctgaaccagctggagcaattggccctgacgcaaaaccagaccttgcgg
atcgccgcgacgcgtcttgagcaagccaggcaacaggtgacggtcagcgccgccggcctg
tttccgcaggtgagtctgcaggccggcgccgctcgccagaaaatttcagccaaccggccg
ctcagcgcctatggcacgccgagccagtcgaccgtgcagaacaacttccagctcggcttt
gcggtcagttatgaagccgacttgtttggccgggtacgccgcacggtggagcaggcgcgt
gcctcttccgagcaggctggtgctgattttgaaaacgccaagctggtgctgatgtcggaa
ctggccgccgattatttcaatctgcgcgagctggatgccgaaatcgacgtggtgcgccag
ggtatcgccttgcaacagaaatccctggaattcatcaccgaccgccatgacctgggcgtc
gcttccggcctggatctggcgcagcagcaggcgctgcttgacgcaagcaagacccagctt
gaactattgcaaaaccagcgtatgcagtacgaacacgcactcgccaccatgactggcacg
cccgctccgcaattcaagctggaaccggcgctgacgctgatgacggcggtattgtcgccc
ttgcccgttggtctgccatccgatctgctgcagcgccgccctgatgttgcttctgccgaa
cgcgccgtggcggccgccaatgccggcattggcgtggcgcgcgcggcatacttcccgact
atcctgctgcagccgaacggtggctgggacagcaaccagatcggcaatctgctgagcgca
cccagcctgctctggtcgcttggcacctcgatcacccaaaacctgttcgatgccggcaag
acccgcgccggcgtgaagattgccgaagccggctacaccgctgcggtagccaattaccgg
caaacggtgctggttgcgatgcaggaagtcgaggatggcatcgatggcctggcggtgctg
gggcgcgccggcaagcaggccgaggcgagcgtgcatagctcgcaacgggtgctcgatctt
gccaacgaccgctacaccggcggcctcgacacctatctcgatgtcatcacggcgcagcaa
acgctgctgaccaatcagcgccagatggtgcagatcaacggccagcggatgctgacctcg
gtttatctggtcaaggcgctgggcggcggctggcagggcgatacggcgcaagcggccagg
tga
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