Collimonas arenae: LT85_1726
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Entry
LT85_1726 CDS
T03512
Name
(GenBank) Cobalt/zinc/cadmium efflux RND transporter
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
care
Collimonas arenae
Pathway
care01501
beta-Lactam resistance
care01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
care00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LT85_1726
01503 Cationic antimicrobial peptide (CAMP) resistance
LT85_1726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
care03036
]
LT85_1726
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_1726
01504 Antimicrobial resistance genes [BR:
care01504
]
LT85_1726
Chromosome and associated proteins [BR:
care03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LT85_1726
Transporters [BR:
care02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LT85_1726
Antimicrobial resistance genes [BR:
care01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LT85_1726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
AIY40884
UniProt:
A0A0A1FB43
LinkDB
All DBs
Position
complement(1897348..1898406)
Genome browser
AA seq
352 aa
AA seq
DB search
MNKKIIYISAGCAAGVLAVTAGIALSVSPKAAEVAAPEPSAQVTVQALQKKNMSLILTAF
GDVAPGLTQTISSAFPAQITRLAVLQGQLVKKGSPLVELASDPTTRLAYQQAQSASTLAA
AEFTRIEALMKLQLATQSQLDAANKARQDATAALEAQRTLGGGSAAVTLTAPADGIVLGL
TAAQGDRIQPGAPVMQFGVTANLKILLGVDPADVSRIKKGMAVTLSPLADPKTKIQSTVS
EIQNLIDPKTQLISVVVKAPADPRLVPAMRVRAEITTEQEQAFEVPRQAVLTDAHGAYLY
QVKGHLAHRVNLRSVLDNRETLGVNGDIDPAAPLVVLGNYELQDGMPVRETR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaaatcatttatatctccgcaggttgcgccgcaggcgtgctggccgtcacc
gccggtattgcgctcagcgtcagcccaaaagccgccgaggtggctgctcccgagccgtcg
gcccaggtcactgtgcaagcgctgcagaaaaaaaacatgtccttgatcttgacggctttc
ggcgacgttgcgccggggctcacgcaaaccatcagcagcgcctttcctgcgcagataacg
cggctcgccgtattgcaaggacaactggtcaagaaaggtagccctcttgtggaactggcc
agcgaccccaccaccagactcgcctatcaacaagcacaaagcgccagcacgctggccgcc
gcggaattcacgcgcattgaagccttgatgaaattacagttggcgacacagtcgcaactg
gacgcagcgaacaaagcccggcaggacgccacagcggcgctggaagcacaaagaacgctg
ggtggcggcagcgcggcagtaacgctgacggcgccggccgacggtatcgtgcttggattg
actgccgcgcagggagaccggatccagccgggcgcgccagtcatgcaattcggcgtcacc
gccaacctgaaaatattgctgggcgtcgatcctgcagatgtgtcgcgcattaagaaaggc
atggctgtgacgctctcgccgctagccgatccgaagacgaaaatccagtcgacagtcagc
gaaatacagaatctgatcgatccaaaaacccagctcatcagcgtcgtcgtcaaagcgcct
gccgatccgcgcctggtccccgccatgcgtgtacgcgccgagatcacgacagagcaggaa
caggcgttcgaagtgccgcgccaggccgtgcttaccgacgcacacggcgcttacctgtat
caagtcaagggacatctggcacatcgggttaacttgcgcagtgtgctggacaatcgcgaa
acgcttggcgtcaacggcgacatcgatcccgccgcaccgctggtggtgctaggcaattat
gaactgcaagatggcatgccggtaagggagacgcgctga
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